RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DUSP3P51452 185 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 WNT3AP56704 352 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 SRP54P61011 504 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 E2F1Q01094 437 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 OCRLQ01968 901 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CDH17Q12864 832 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ACOX1Q15067 660 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CDKN3Q16667 212 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 DENND5AQ6IQ26 1287 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ESRP1Q6NXG1 681 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 GUSBP11Q6P575 273 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 TSPAN33Q86UF1 283 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 SLC35F3Q8IY50 421 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CBARPQ8N350 705 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.17□□□□□ -0.78
TPM1-212ENST00000558347 IPMKQ8NFU5 416 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PIH1D2Q8WWB5 315 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PDXPQ96GD0 296 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 WDR92Q96MX6 357 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ZNF570Q96NI8 536 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 TBL1YQ9BQ87 522 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 LGR4Q9BXB1 951 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CADM1Q9BY67 442 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 FAM96AQ9H5X1 160 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ARL8BQ9NVJ2 186 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 MOCS1Q9NZB8 636 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 UBP1Q9NZI7 540 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 BFARQ9NZS9 450 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 STOML1Q9UBI4 398 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 RAI2Q9Y5P3 530 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 APC2O95996 2303 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 LOC285095A0A1B0GVY8 99 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CPED1A4D0V7 1026 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 EME2A4GXA9 379 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 CXorf49A8MYA2 514 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 FCHO1O14526 889 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CASC3O15234 703 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 GYG2O15488 501 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 GSC2O15499 205 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 AVILO75366 819 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PMPCBO75439 489 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 RASGRP1O95267 797 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 GP1BAP07359 652 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 BPGMP07738 259 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ANXA6P08133 673 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 RPSAP08865 295 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 ALPIP09923 528 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 MYL2P10916 166 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ESRRAP11474 423 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 CTPS1P17812 591 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 SERPINB3P29508 390 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 TRIM23P36406 574 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ETV3P41162 512 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CD86P42081 329 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 BLKP51451 505 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 RAP1GDS1P52306 607 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 KIAA1024LP59773 190 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 FRG1Q14331 258 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 TAF11Q15544 211 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ZRSR2Q15696 482 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 INSCQ1MX18 579 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 TSNAXIP1Q2TAA8 658 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PERM1Q5SV97 790 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 C6orf132Q5T0Z8 1188 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ARMC12Q5T9G4 340 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CDCP2Q5VXM1 449 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PNCKQ6P2M8 343 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CRTC1Q6UUV9 634 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 EFL1Q7Z2Z2 1120 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 HSD11B1LQ7Z5J1 315 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CRLF3Q8IUI8 442 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 NUDCD3Q8IVD9 361 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 APLFQ8IW19 511 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 CACTIN-AS1Q8N1I8 211 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 FSTL5Q8N475 847 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 OR52K1Q8NGK4 314 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 OR1E3Q8WZA6 343 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 CDKL2Q92772 493 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 MIEF2Q96C03 454 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 NXPE2Q96DL1 559 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 NUS1Q96E22 293 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 SCRN2Q96FV2 425 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 MCCC1Q96RQ3 725 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 MIPEPQ99797 713 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 FICDQ9BVA6 458 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 DENND2DQ9H6A0 471 aaPredicted RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 FGF22Q9HCT0 170 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 MRPL40Q9NQ50 206 aaKnown RBP10.17□□□□□ -0.78
TPM1-212ENST00000558347 SMYD2Q9NRG4 433 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.17□□□□□ -0.78
TPM1-212ENST00000558347 KLQ9UEF7 1012 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PPIL1Q9Y3C6 166 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 PCDHB1Q9Y5F3 818 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 KNTC1P50748 2209 aa10.17□□□□□ -0.78
TPM1-212ENST00000558347 ASXL3Q9C0F0 2248 aa10.16□□□□□ -0.78
TPM1-212ENST00000558347 LOC400499M0QZD8 3231 aa10.16□□□□□ -0.78
TPM1-212ENST00000558347 MAGEB16A2A368 324 aa10.16□□□□□ -0.78
TPM1-212ENST00000558347 CAPN14A8MX76 684 aa10.16□□□□□ -0.78
TPM1-212ENST00000558347 GLRA3O75311 464 aa10.16□□□□□ -0.78
TPM1-212ENST00000558347 USP12O75317 370 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms