RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TMEM246Q9BRR3 403 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 MED10Q9BTT4 135 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 THUMPD3Q9BV44 507 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 RBM4Q9BWF3 364 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 ERVK-6Q9BXR3 956 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 UGT2B28Q9BY64 529 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 LRRC3Q9BY71 257 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 FAM49AQ9H0Q0 323 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 KAT8Q9H7Z6 458 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 ZBTB20Q9HC78 741 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 SDR39U1Q9NRG7 319 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 SNTG2Q9NY99 539 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 INTS6Q9UL03 887 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5□□□□□ -1.61
HMG20A-204ENST00000558288 TPRKBQ9Y3C4 175 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SHROOM3Q8TF72 1996 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 LOC100506127A0A0U1RQW1 187 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 TYW5A2RUC4 315 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 ZSCAN5BA6NJL1 495 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 RGS13O14921 159 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CNMDO75829 334 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PGLSO95336 258 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 FGBP02675 491 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CYBBP04839 570 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PCMT1P22061 227 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ARNTP27540 789 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 HTR1EP28566 365 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ADRA1BP35368 520 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 MNX1P50219 401 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 CSRP3P50461 194 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CLCA4Q14CN2 919 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 LAPTM4AQ15012 233 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 RBBP7Q16576 425 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF181Q2M3W8 571 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF404Q494X3 552 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 FAM109BQ6ICB4 259 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 ENPP6Q6UWR7 440 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ARMCX2Q7L311 632 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 C11orf74Q86VG3 221 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SLC22A15Q8IZD6 547 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 DEPDC4Q8N2C3 294 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 FAM86B1Q8N7N1 296 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 DCBLD1Q8N8Z6 715 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 FNDC5Q8NAU1 212 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PAPD5Q8NDF8 572 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 AFG1LQ8WV93 481 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 WNT8BQ93098 351 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SLC47A1Q96FL8 570 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 TTYH2Q9BSA4 534 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SIK2Q9H0K1 926 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SMOC2Q9H3U7 446 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 RASSF1Q9NS23 344 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PRMT7Q9NVM4 692 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 DDIT4Q9NX09 232 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 RAPGEFL1Q9UHV5 662 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF639Q9UID6 485 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SATB2Q9UPW6 733 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 N6AMT1Q9Y5N5 214 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 NUP205Q92621 2012 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 MYO1GB0I1T2 1018 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 RFXAPO00287 272 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 UPK1AO00322 258 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CLDN5O00501 218 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PRMT5O14744 637 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 PSMD3O43242 534 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 DNAJB5O75953 348 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ANXA9O76027 345 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CRYZL1O95825 349 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 MT-ND2P03891 347 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 FYNP06241 537 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ENDOUP21128 410 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 IFNA8P32881 189 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CLCN5P51795 746 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 TKTL1P51854 596 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 GNG2P59768 71 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CDK5R2Q13319 367 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PPIGQ13427 754 aaKnown RBP eCLIP5□□□□□ -1.61
HMG20A-204ENST00000558288 RAPSNQ13702 412 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 SELPLGQ14242 412 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CBX2Q14781 532 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 PLA2G4EQ3MJ16 856 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 WDR45BQ5MNZ6 344 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 TPRG1LQ5T0D9 272 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ATAD3CQ5T2N8 411 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ZNF544Q6NX49 715 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 HFE2Q6ZVN8 426 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 NEK10Q6ZWH5 1172 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 BEND5Q7L4P6 421 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 UBE2Q1Q7Z7E8 422 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 TLK2Q86UE8 772 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 PTRH1Q86Y79 214 aaKnown RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 FAM126BQ8IXS8 530 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 OR8H2Q8N162 312 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 METTL4Q8N3J2 472 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 ATPAF2Q8N5M1 289 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 OR10Q1Q8NGQ4 319 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 TRIM43Q96BQ3 446 aaPredicted RBP5□□□□□ -1.61
HMG20A-204ENST00000558288 CEP19Q96LK0 163 aa5□□□□□ -1.61
HMG20A-204ENST00000558288 CEP295NLQ96MC4 621 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms