RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 TP53BP1Q12888 1972 aaPredicted RBP12.19□□□□□ -0.46
TPM1-209ENST00000558072 ABCA7Q8IZY2 2146 aa12.19□□□□□ -0.46
TPM1-209ENST00000558072 A0A1W2PR77 199 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 SCAMP1O15126 338 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 YKT6O15498 198 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 PHGDHO43175 533 aaKnown RBP12.18□□□□□ -0.46
TPM1-209ENST00000558072 LILRB5O75023 590 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 GPC4O75487 556 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 HIST1H2AGP0C0S8 130 aaPredicted RBP12.18□□□□□ -0.46
TPM1-209ENST00000558072 CTSEP14091 401 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 HIST1H2ADP20671 130 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 IDSP22304 550 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CCR7P32248 378 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 ABCG1P45844 678 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CTSCP53634 463 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 PRKAA2P54646 552 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 HSPA14Q0VDF9 509 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 ILF3Q12906 894 aaKnown RBP eCLIP12.18□□□□□ -0.46
TPM1-209ENST00000558072 CSHL1Q14406 222 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 KHDC1Q4VXA5 237 aaKnown RBP12.18□□□□□ -0.46
TPM1-209ENST00000558072 CDKL4Q5MAI5 379 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 TPRG1LQ5T0D9 272 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 PAQR3Q6TCH7 311 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 IL27RAQ6UWB1 636 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 SH2D5Q6ZV89 423 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CMC1Q7Z7K0 106 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CLEC14AQ86T13 490 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 SYT12Q8IV01 421 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CEP97Q8IW35 865 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CFAP206Q8IYR0 622 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 KRT222Q8N1A0 295 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 C4orf33Q8N1A6 199 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 FSTL5Q8N475 847 aaPredicted RBP12.18□□□□□ -0.46
TPM1-209ENST00000558072 SIDT2Q8NBJ9 832 aaKnown RBP12.18□□□□□ -0.46
TPM1-209ENST00000558072 OR13H1Q8NG92 308 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 SCYL1Q96KG9 808 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 HIST1H2AHQ96KK5 128 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 HIST1H2AJQ99878 128 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 H2AFJQ9BTM1 129 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 MRPL46Q9H2W6 279 aaKnown RBP12.18□□□□□ -0.46
TPM1-209ENST00000558072 SMOC1Q9H4F8 434 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CAB39LQ9H9S4 337 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 CYP4F12Q9HCS2 524 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 SUFUQ9UMX1 484 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 PLLPQ9Y342 182 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 PCDHGA5Q9Y5G8 931 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 HEBP2Q9Y5Z4 205 aa12.18□□□□□ -0.46
TPM1-209ENST00000558072 FANCMQ8IYD8 2048 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 SLC5A10A0PJK1 596 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 TMEM202A6NGA9 273 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 OR5K4A6NMS3 321 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 IQCF5A8MTL0 148 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 GOLGA8RI6L899 631 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 SGTAO43765 313 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 ZBTB14O43829 449 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 TYROBPO43914 113 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 CATP04040 527 aaKnown RBP12.17□□□□□ -0.46
TPM1-209ENST00000558072 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
TPM1-209ENST00000558072 CYP2A7P20853 494 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 ITPKAP23677 461 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 MAP4P27816 1152 aaKnown RBP12.17□□□□□ -0.46
TPM1-209ENST00000558072 NDUFS1P28331 727 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 HPDP32754 393 aaPredicted RBP12.17□□□□□ -0.46
TPM1-209ENST00000558072 HALP42357 657 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 GNPDA1P46926 289 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 ARRB1P49407 418 aaPredicted RBP12.17□□□□□ -0.46
TPM1-209ENST00000558072 HK3P52790 923 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 HNRNPKP61978 463 aaKnown RBP eCLIP12.17□□□□□ -0.46
TPM1-209ENST00000558072 IL9RQ01113 521 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 BOP1Q14137 746 aaKnown RBP12.17□□□□□ -0.46
TPM1-209ENST00000558072 GBX1Q14549 363 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 ELOCQ15369 112 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 DUOXA1Q1HG43 343 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 METRNLQ641Q3 311 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 CRTC3Q6UUV7 619 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 UNC5DQ6UXZ4 953 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 WASH2PQ6VEQ5 465 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 SLC22A15Q8IZD6 547 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 RAB42Q8N4Z0 105 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 MCOLN3Q8TDD5 553 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 SKA2Q8WVK7 121 aaPredicted RBP12.17□□□□□ -0.46
TPM1-209ENST00000558072 KIAA1191Q96A73 305 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 ZBTB9Q96C00 473 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 LINGO1Q96FE5 620 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 SELENOSQ9BQE4 189 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 WASH6PQ9NQA3 447 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 SPASTQ9UBP0 616 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 MED16Q9Y2X0 877 aa12.17□□□□□ -0.46
TPM1-209ENST00000558072 TMEM120BA0PK00 339 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 BIRC5O15392 142 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 SMIM24O75264 130 aa12.16□□□□□ -0.46
TPM1-209ENST00000558072 H2AFYO75367 372 aaKnown RBP12.16□□□□□ -0.46
TPM1-209ENST00000558072 SNUPNO95149 360 aaKnown RBP12.16□□□□□ -0.46
TPM1-209ENST00000558072 WISP3O95389 354 aaPredicted RBP12.16□□□□□ -0.46
TPM1-209ENST00000558072 CSF2P04141 144 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms