RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 EFL1Q7Z2Z2 1120 aaKnown RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 RAB44Q7Z6P3 723 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 IGDCC3Q8IVU1 814 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 TRIM48Q8IWZ4 208 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 PHC3Q8NDX5 983 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 SLC37A2Q8TED4 501 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 CXorf40BQ96DE9 158 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 MVB12BQ9H7P6 319 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 COG4Q9H9E3 785 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 SLC40A1Q9NP59 571 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 PRDM8Q9NQV8 689 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 SIRPGQ9P1W8 387 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 DNAJC16Q9Y2G8 782 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 SPAARA0A1B0GVQ0 90 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 UBA6A0AVT1 1052 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-234ENST00000557703 SLC5A10A0PJK1 596 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 GIPC1O14908 333 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 OPA1O60313 960 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 SNX2O60749 519 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 GPC4O75487 556 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 RPN2P04844 631 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 TUBBP07437 444 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 PRSS56P0CW18 603 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 AOAHP28039 575 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 STX2P32856 288 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 PHBP35232 272 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 DEKP35659 375 aaKnown RBP13.4□□□□□ -0.26
SHMT2-234ENST00000557703 SLC1A2P43004 574 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 DNAJC3Q13217 504 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 KCTD19Q17RG1 926 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-234ENST00000557703 TTLL9Q3SXZ7 439 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 TEDDM1Q5T9Z0 273 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 GUSBP11Q6P575 273 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 OTOAQ7RTW8 1153 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 SLCO6A1Q86UG4 719 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 ELMO1Q92556 727 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 CFAP36Q96G28 342 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 SLC38A3Q99624 504 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 CCDC3Q9BQI4 270 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 OR52A5Q9H2C5 316 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 PPANQ9NQ55 473 aaKnown RBP13.4□□□□□ -0.26
SHMT2-234ENST00000557703 IARS2Q9NSE4 1012 aaKnown RBP13.4□□□□□ -0.26
SHMT2-234ENST00000557703 POLG2Q9UHN1 485 aa13.4□□□□□ -0.26
SHMT2-234ENST00000557703 ESYT3A0FGR9 886 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 E5RI56 91 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 GOLGA8TH3BQL2 631 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 NTN3O00634 580 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-234ENST00000557703 ADRB1P08588 477 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 CBSLP0DN79 551 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 ERVK-10P10266 1014 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 MTHFD1P11586 935 aaKnown RBP13.39□□□□□ -0.27
SHMT2-234ENST00000557703 ENO3P13929 434 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-234ENST00000557703 BRAFP15056 766 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 RPL10P27635 214 aaKnown RBP13.39□□□□□ -0.27
SHMT2-234ENST00000557703 CBSP35520 551 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 SLC19A1P41440 591 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
SHMT2-234ENST00000557703 SHC2P98077 582 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 CTBP1Q13363 440 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 RPE65Q16518 533 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 PLA2G4EQ3MJ16 856 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-234ENST00000557703 TMEM26Q6ZUK4 368 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 NEK10Q6ZWH5 1172 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 TMPRSS7Q7RTY8 843 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 SPRED1Q7Z699 444 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 PDZD3Q86UT5 571 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 ANKMY2Q8IV38 441 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 SLC22A15Q8IZD6 547 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 OR10G6Q8NH81 332 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 MAGEC3Q8TD91 643 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 IFT81Q8WYA0 676 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 CCDC74AQ96AQ1 378 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 WDR83Q9BRX9 315 aaKnown RBP13.39□□□□□ -0.27
SHMT2-234ENST00000557703 RAB33BQ9H082 229 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 TXNDC16Q9P2K2 825 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 PRSS21Q9Y6M0 314 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 RNF215Q9Y6U7 377 aa13.39□□□□□ -0.27
SHMT2-234ENST00000557703 PPM1DO15297 605 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 VPS26AO75436 327 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 BANF1O75531 89 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 SLU7O95391 586 aaKnown RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CPNE6O95741 557 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 AHSGP02765 367 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CHRM3P20309 590 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 MCM3P25205 808 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TNFRSF8P28908 595 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 PBLDP30039 288 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 FMO4P31512 558 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CCR7P32248 378 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CARSP49589 748 aaKnown RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TRA2AQ13595 282 aaKnown RBP eCLIP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 SPIDRQ14159 915 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CLCA4Q14CN2 919 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 FASTKD3Q14CZ7 662 aaKnown RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TRADDQ15628 312 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CDCP2Q5VXM1 449 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms