RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 OSER1Q9NX31 292 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 FLRT1Q9NZU1 646 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 LEF1Q9UJU2 399 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 CPSF3Q9UKF6 684 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 PAM16Q9Y3D7 125 aa3.07□□□□□ -1.92
TRAV28-201ENST00000557548 ASTN2O75129 1339 aaPredicted RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 POLR2AP24928 1970 aaKnown RBP3.07□□□□□ -1.92
TRAV28-201ENST00000557548 A0A087X1B8 175 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 A0A1W2PPQ1 181 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 GAGE12JA6NER3 117 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 C5orf52A6NGY3 159 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 C1QTNF3-AMACRE9PGA6 284 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ANKRD28O15084 1053 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 FOXN1O15353 648 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 KCNN4O15554 427 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 AP5Z1O43299 807 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ITM2AO43736 263 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SELENOFO60613 162 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 NDUFS7O75251 213 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SEC22BO75396 215 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 VNN2O95498 520 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 IFNA2P01563 188 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 OR2T7P0C7T2 308 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ACEP12821 1306 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 LBPP18428 481 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ITIH1P19827 911 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SCP2P22307 547 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 UGT1A1P22309 533 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 KCNA5P22460 613 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 PROZP22891 400 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ACAT1P24752 427 aaKnown RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 MPZP25189 248 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 HOXD9P28356 352 aaPredicted RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 MPGP29372 298 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 STX2P32856 288 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SOAT1P35610 550 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SNU13P55769 128 aaKnown RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 HNRNPH2P55795 449 aaKnown RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 CLDN20P56880 219 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 UBASH3AP57075 661 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 TROAPQ12815 778 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 FOXF2Q12947 444 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 GPR18Q14330 331 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 CTF1Q16619 201 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 UGCGQ16739 394 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 HFEQ30201 348 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 TWISTNBQ3B726 338 aaPredicted RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 KBTBD12Q3ZCT8 623 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 TCTE1Q5JU00 501 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 Q5PR19 223 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 PAPPA-AS1Q5QFB9 102 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 DCAF12L2Q5VW00 463 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 C18orf63Q68DL7 685 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 WDR73Q6P4I2 378 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 DLK2Q6UY11 383 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 Q6ZSV7 163 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 RABEPKQ7Z6M1 372 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SLC9B2Q86UD5 537 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ANKRD13BQ86YJ7 626 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 CNTN4Q8IWV2 1026 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 CLYBLQ8N0X4 340 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 AADATQ8N5Z0 425 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 GCSAMQ8N6F7 178 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ST7LQ8TDW4 575 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SLC44A1Q8WWI5 657 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 STAMBPL1Q96FJ0 436 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SPATA33Q96N06 139 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SFXN2Q96NB2 322 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF582Q96NG8 517 aaPredicted RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SLC22A12Q96S37 553 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 MYCBPQ99417 103 aaPredicted RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 CMKLR1Q99788 373 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 ZNF350Q9GZX5 532 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 SEMA6AQ9H2E6 1030 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 C17orf75Q9HAS0 396 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 TBC1D7Q9P0N9 293 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 RCC2Q9P258 522 aaKnown RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 STK26Q9P289 416 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 FETUBQ9UGM5 382 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 FBXL2Q9UKC9 423 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 TMCC3Q9ULS5 477 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 PCDHA12Q9UN75 941 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 PADI2Q9Y2J8 665 aa3.06□□□□□ -1.92
TRAV28-201ENST00000557548 MTF2Q9Y483 593 aaPredicted RBP3.06□□□□□ -1.92
TRAV28-201ENST00000557548 UNC13AQ9UPW8 1703 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 A0A0A6YYC8 382 aaPredicted RBP3.05□□□□□ -1.92
TRAV28-201ENST00000557548 PRSS51A0A1B0GVH4 220 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 SMIM35A0A1B0GVV1 85 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 TMEM221A6NGB7 291 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 MS4A18H0YCH9 400 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 I3L1I5 382 aaPredicted RBP3.05□□□□□ -1.92
TRAV28-201ENST00000557548 SOCS6O14544 535 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 CAPN9O14815 690 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 VEGFDO43915 354 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 NME6O75414 186 aaPredicted RBP3.05□□□□□ -1.92
TRAV28-201ENST00000557548 BCAR3O75815 825 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 BCAS2O75934 225 aaPredicted RBP3.05□□□□□ -1.92
TRAV28-201ENST00000557548 SLC16A8O95907 504 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 IGLV2-14P01704 120 aa3.05□□□□□ -1.92
TRAV28-201ENST00000557548 PLA2G4BP0C869 781 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms