RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TRIM7Q9C029 511 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 SLCO5A1Q9H2Y9 848 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 GPR108Q9NPR9 543 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 C5AR2Q9P296 337 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 LARSQ9P2J5 1176 aaKnown RBP1.67□□□□□ -2.14
HIF1A-212ENST00000557538 MYO6Q9UM54 1294 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 FAM169AQ9Y6X4 670 aa1.67□□□□□ -2.14
HIF1A-212ENST00000557538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF521Q96K83 1311 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 A0A1W2PPI3 338 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 O00370 1275 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF254O75437 659 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 DNTTP04053 509 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 IGKV2-30P06310 120 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 PAX1P15863 534 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ANXA7P20073 488 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ANOS1P23352 680 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 HRH2P25021 359 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 C21orf33P30042 268 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 LIG4P49917 911 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 NAGLUP54802 743 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 TROAPQ12815 778 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 GRSF1Q12849 480 aaKnown RBP eCLIP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 KIR2DS3Q14952 304 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 TWISTNBQ3B726 338 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZSCAN23Q3MJ62 389 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 FAM174BQ3ZCQ3 159 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 CFAP58Q5T655 872 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 GRTP1Q5TC63 336 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 AP1ARQ63HQ0 302 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 HAUS6Q7Z4H7 955 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 KMT5CQ86Y97 462 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 CNGA4Q8IV77 575 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 RDM1Q8NG50 284 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ANKRD49Q8WVL7 239 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 FRAT1Q92837 279 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 FAM162AQ96A26 154 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SYAP1Q96A49 352 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ERLEC1Q96DZ1 483 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 FAM84BQ96KN1 310 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SRSF8Q9BRL6 282 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 TCHPQ9BT92 498 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 LRRC1Q9BTT6 524 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ABHD6Q9BV23 337 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 NUF2Q9BZD4 464 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 NACA2Q9H009 215 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 IQCGQ9H095 443 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 C2orf42Q9NWW7 574 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SPATA7Q9P0W8 599 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SLC9A2Q9UBY0 812 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 RCOR1Q9UKL0 485 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 PTGDR2Q9Y5Y4 395 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 PDLIM1O00151 329 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 HNRNPCL1O60812 293 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 PRAMEF11O60813 436 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 RTN2O75298 545 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 KRT33AO76009 404 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 CLDN14O95500 239 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 KRT3P12035 628 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 IFNAR1P17181 557 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 BDKRB2P30411 391 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ASCL1P50553 236 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 PSMC6P62333 389 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 RPL24P83731 157 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZXDBP98169 803 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 RELQ04864 619 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 EEF1A2Q05639 463 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 AIMP1Q12904 312 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 BTG3Q14201 252 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZDHHC20Q5W0Z9 365 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 CST9LP1Q5W188 147 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 TPGS2Q68CL5 300 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF517Q6ZMY9 492 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ASB18Q6ZVZ8 466 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SDCCAG8Q86SQ7 713 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 GALNT13Q8IUC8 556 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 NAGSQ8N159 534 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZBTB8BQ8NAP8 495 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 GSDMBQ8TAX9 411 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 HM13Q8TCT9 377 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 BRSK1Q8TDC3 778 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SPACA9Q96E40 222 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SAT2Q96F10 170 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ELMOD3Q96FG2 381 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SCMH1Q96GD3 660 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SLC39A3Q9BRY0 314 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 MXD3Q9BW11 206 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 SEBOXQ9HB31 216 aaPredicted RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 OLAHQ9NV23 265 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ARHGEF38Q9NXL2 777 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 IL20Q9NYY1 176 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 GIMAP2Q9UG22 337 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 KCNG2Q9UJ96 466 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ISY1Q9ULR0 285 aaKnown RBP1.66□□□□□ -2.14
HIF1A-212ENST00000557538 PCDHGB4Q9UN71 923 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 ZNF711Q9Y462 761 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 TRIM17Q9Y577 477 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 EVC2Q86UK5 1308 aa1.66□□□□□ -2.14
HIF1A-212ENST00000557538 A0A0G2JNG1 304 aa1.65□□□□□ -2.14
HIF1A-212ENST00000557538 ERICH4A6NGS2 130 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms