RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PRKD1Q15139 912 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-210ENST00000557431 INPP5JQ15735 1006 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-210ENST00000557431 SLC18A3Q16572 532 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 PTCHD3Q3KNS1 767 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 ZNF787Q6DD87 383 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 ZC3H18Q86VM9 953 aaKnown RBP13.73□□□□□ -0.21
SLIRP-210ENST00000557431 OOSP2Q86WS3 158 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 TMEM151BQ8IW70 566 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 DDHD1Q8NEL9 900 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 ADAMTS17Q8TE56 1095 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 GOLPH3Q9H4A6 298 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 KCND1Q9NSA2 647 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 KLHL8Q9P2G9 620 aaPredicted RBP13.73□□□□□ -0.21
SLIRP-210ENST00000557431 FAM153AQ9UHL3 310 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 SLC24A2Q9UI40 661 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 SNX7Q9UNH6 387 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 TEX15Q9BXT5 2789 aa13.73□□□□□ -0.21
SLIRP-210ENST00000557431 NOTCH2Q04721 2471 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 CNTRLQ7Z7A1 2325 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 TCP11X1B4DZS4 312 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 TMEM63AO94886 807 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 TMEM253P0C7T8 217 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 PVRP15151 417 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 LMAN1P49257 510 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 ITGA1P56199 1179 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 FOXL2P58012 376 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 TUBB4BP68371 445 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 PDE1BQ01064 536 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 TUBB2AQ13885 445 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 SLC14A2Q15849 920 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 ASTE1Q2TB18 679 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-210ENST00000557431 LDLRAP1Q5SW96 308 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 JMJD6Q6NYC1 403 aaPredicted RBP13.72□□□□□ -0.21
SLIRP-210ENST00000557431 FAM198BQ6UWH4 519 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 ZNF567Q8N184 647 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 RBMXL3Q8N7X1 1067 aaKnown RBP13.72□□□□□ -0.21
SLIRP-210ENST00000557431 OR4E2Q8NGC2 313 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 OR1L3Q8NH93 324 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 BRSK1Q8TDC3 778 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 THAP4Q8WY91 577 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 CLIP3Q96DZ5 547 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 C19orf60Q96EN9 201 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 CHP1Q99653 195 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 APOL2Q9BQE5 337 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 TUBB2BQ9BVA1 445 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 GPR87Q9BY21 358 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 FAM96AQ9H5X1 160 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 MLXIPLQ9NP71 852 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 PCDHGA9Q9Y5G4 932 aaKnown RBP13.72□□□□□ -0.21
SLIRP-210ENST00000557431 ARL5AQ9Y689 179 aa13.72□□□□□ -0.21
SLIRP-210ENST00000557431 TMEM150CB9EJG8 249 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 SGTAO43765 313 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 CST8O60676 142 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 ZBTB11O95625 1053 aaPredicted RBP13.71□□□□□ -0.21
SLIRP-210ENST00000557431 RECKO95980 971 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 CAPN1P07384 714 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 ST6GAL1P15907 406 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 MSH3P20585 1137 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 CDH3P22223 829 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 ATP1A4Q13733 1029 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 SLC1A5Q15758 541 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 METRNLQ641Q3 311 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 SLC6A19Q695T7 634 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 ARMC6Q6NXE6 501 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 ZNF517Q6ZMY9 492 aaPredicted RBP13.71□□□□□ -0.21
SLIRP-210ENST00000557431 PID1Q7Z2X4 250 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 KMT5CQ86Y97 462 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 ZBTB2Q8N680 514 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 TFB1MQ8WVM0 346 aaKnown RBP13.71□□□□□ -0.21
SLIRP-210ENST00000557431 FCRL4Q96PJ5 515 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 CD180Q99467 661 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 GORASP1Q9BQQ3 440 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 ZCCHC2Q9C0B9 1178 aaKnown RBP13.71□□□□□ -0.21
SLIRP-210ENST00000557431 XPO4Q9C0E2 1151 aaKnown RBP13.71□□□□□ -0.21
SLIRP-210ENST00000557431 DEF6Q9H4E7 631 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 FKBPLQ9UIM3 349 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 TCFL5Q9UL49 500 aa13.71□□□□□ -0.21
SLIRP-210ENST00000557431 CREBBPQ92793 2442 aa13.71□□□□□ -0.22
SLIRP-210ENST00000557431 GSAPA4D1B5 854 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 ZNF487B1APH4 448 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 MEN1O00255 615 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 CCL22O00626 93 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 STX7O15400 261 aaKnown RBP13.7□□□□□ -0.22
SLIRP-210ENST00000557431 PRAMEF1O95521 474 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 AGTP01019 485 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 HLA-DPA1P20036 260 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 LPOP22079 712 aaPredicted RBP13.7□□□□□ -0.22
SLIRP-210ENST00000557431 HNRNPH3P31942 346 aaKnown RBP13.7□□□□□ -0.22
SLIRP-210ENST00000557431 MARCKSL1P49006 195 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 TMPRSS15P98073 1019 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 ITGA9Q13797 1035 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 GSE1Q14687 1217 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 KYNUQ16719 465 aa13.7□□□□□ -0.22
SLIRP-210ENST00000557431 ODF2Q5BJF6 829 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms