RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 NOP9Q86U38 636 aaKnown RBP12.12□□□□□ -0.47
PSEN1-220ENST00000557037 CREBRFQ8IUR6 639 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.12□□□□□ -0.47
PSEN1-220ENST00000557037 DNAAF3Q8N9W5 541 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 CA5BP1Q8WTZ4 195 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 NINJ1Q92982 152 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 SDCCAG3Q96C92 435 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 MAGED4Q96JG8 741 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 LMF1Q96S06 567 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 C17orf62Q9BQA9 187 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 MGME1Q9BQP7 344 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 C11orf70Q9BRQ4 267 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
PSEN1-220ENST00000557037 CFAP20Q9Y6A4 193 aaKnown RBP12.12□□□□□ -0.47
PSEN1-220ENST00000557037 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 DAPK3O43293 454 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 FZD6O60353 706 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 PEX11BO96011 259 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 CRYABP02511 175 aaKnown RBP12.11□□□□□ -0.47
PSEN1-220ENST00000557037 KRT3P12035 628 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 POLR2CP19387 275 aaPredicted RBP12.11□□□□□ -0.47
PSEN1-220ENST00000557037 TNFSF10P50591 281 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 PMP22Q01453 160 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 DSG2Q14126 1118 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 GALNT3Q14435 633 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 INAQ16352 499 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 CA9Q16790 459 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 EXOC3L4Q17RC7 722 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 WDR59Q6PJI9 974 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 SLC30A5Q8TAD4 765 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 NELFBQ8WX92 580 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 ZNF599Q96NL3 588 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 GSDMAQ96QA5 445 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 SPATA16Q9BXB7 569 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
PSEN1-220ENST00000557037 ST6GALNAC2Q9UJ37 374 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 CTNND2Q9UQB3 1225 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 CHKBQ9Y259 395 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 PLEKHA6Q9Y2H5 1048 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 HIVEP2P31629 2446 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 VPS13CQ709C8 3753 aa12.11□□□□□ -0.47
PSEN1-220ENST00000557037 C1orf232A0A0U1RR37 186 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 SOCS6O14544 535 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 ZNHIT1O43257 154 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 ZWINTO95229 277 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 GNA14O95837 355 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 PVRP15151 417 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 ST6GAL1P15907 406 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 IGFBP2P18065 325 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 ERCC2P18074 760 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 DCDP81605 110 aaKnown RBP12.1□□□□□ -0.47
PSEN1-220ENST00000557037 KHDC1Q4VXA5 237 aaKnown RBP12.1□□□□□ -0.47
PSEN1-220ENST00000557037 KIRREL2Q6UWL6 708 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 C3P1Q6ZMU1 363 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 WFDC11Q8NEX6 87 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 ANKRD20A12PQ8NF67 263 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 TEKT4Q8WW24 435 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 C18orf12Q96KH6 178 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.1□□□□□ -0.47
PSEN1-220ENST00000557037 DHX35Q9H5Z1 703 aaKnown RBP12.1□□□□□ -0.47
PSEN1-220ENST00000557037 CBX8Q9HC52 389 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 NT5MQ9NPB1 228 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 NPDC1Q9NQX5 325 aaPredicted RBP12.1□□□□□ -0.47
PSEN1-220ENST00000557037 DNAJB12Q9NXW2 375 aaKnown RBP12.1□□□□□ -0.47
PSEN1-220ENST00000557037 PKD2L2Q9NZM6 624 aa12.1□□□□□ -0.47
PSEN1-220ENST00000557037 LUC7L2Q9Y383 392 aaKnown RBP12.1□□□□□ -0.47
PSEN1-220ENST00000557037 DYTNA2CJ06 578 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 GPR89AB7ZAQ6 455 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 RASAL1O95294 804 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 HEXAP06865 529 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 CD63P08962 238 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 INHBBP09529 407 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 GPR89BP0CG08 455 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-220ENST00000557037 VCLP18206 1134 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 UGT1A4P22310 534 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 MMP8P22894 467 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 MMP11P24347 488 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 HTR7P34969 479 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 KRT85P78386 507 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 ITKQ08881 620 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 MYBPHQ13203 477 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 IHHQ14623 411 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 NKAIN1Q4KMZ8 207 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 CES4AQ5XG92 561 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 MRPL14Q6P1L8 145 aaKnown RBP12.09□□□□□ -0.47
PSEN1-220ENST00000557037 RFX8Q6ZV50 586 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 GPR135Q8IZ08 494 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 CARFQ8N187 725 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 BBS5Q8N3I7 341 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 SPRTNQ9H040 489 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-220ENST00000557037 DEF6Q9H4E7 631 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 C1GALT1Q9NS00 363 aa12.09□□□□□ -0.47
PSEN1-220ENST00000557037 DHCR7Q9UBM7 475 aaKnown RBP12.09□□□□□ -0.47
PSEN1-220ENST00000557037 POMT2Q9UKY4 750 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms