RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 GATA5Q9BWX5 397 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-226ENST00000556825 MS4A7Q9GZW8 240 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-226ENST00000556825 BCAS3Q9H6U6 928 aa13.63□□□□□ -0.23
SHMT2-226ENST00000556825 CUEDC1Q9NWM3 386 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-226ENST00000556825 STAP1Q9ULZ2 295 aa13.63□□□□□ -0.23
SHMT2-226ENST00000556825 COL4A1P02462 1669 aa13.63□□□□□ -0.23
SHMT2-226ENST00000556825 A0A1B0GTQ1 180 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 G3V2L1 256 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SMLR1H3BR10 107 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 LRIG2O94898 1065 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 FCER2P06734 321 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 CHRNGP07510 517 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SNRPB2P08579 225 aaKnown RBP13.62□□□□□ -0.23
SHMT2-226ENST00000556825 UMPSP11172 480 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 JUPP14923 745 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 CHRM3P20309 590 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 PIK3CBP42338 1070 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SNAP25P60880 206 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 PSMC6P62333 389 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SMAD2Q15796 467 aaKnown RBP13.62□□□□□ -0.23
SHMT2-226ENST00000556825 COL28A1Q2UY09 1125 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 GPR33Q49SQ1 333 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 FAM182BQ5T319 152 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 PYHIN1Q6K0P9 492 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SCARA5Q6ZMJ2 495 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 FAM183BPQ6ZVS7 135 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 MON1BQ7L1V2 547 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 OVCH2Q7RTZ1 564 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SLC37A3Q8NCC5 494 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 HMGCLL1Q8TB92 370 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SLC38A4Q969I6 547 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 GPR63Q9BZJ6 419 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 XPNPEP3Q9NQH7 507 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 ACTR10Q9NZ32 417 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 EGFL7Q9UHF1 273 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 CSADQ9Y600 493 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SLC15A5A6NIM6 579 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 KRBOX1C9JBD0 128 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 APOL3O95236 402 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 HTR3BO95264 441 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 CYP3A4P08684 503 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 MASP1P48740 699 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 POU3F4P49335 361 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 PLIN5Q00G26 463 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 PRKAA1Q13131 559 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 ASAH1Q13510 395 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 CAMK1Q14012 370 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 GRB7Q14451 532 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 ZACNQ401N2 412 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 RHOUQ7L0Q8 258 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 CLEC4FQ8N1N0 589 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 PELI3Q8N2H9 469 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 RDH13Q8NBN7 331 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 NANPQ8TBE9 248 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 ROPN1LQ96C74 230 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 FAF2Q96CS3 445 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 TUBGCP3Q96CW5 907 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 C19orf60Q96EN9 201 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 MBOAT4Q96T53 435 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 ACOX2Q99424 681 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 SLC25A23Q9BV35 468 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 UGT2B28Q9BY64 529 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 HEXA-AS1Q9H8Q6 139 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 ZNF275Q9NSD4 429 aaPredicted RBP13.62□□□□□ -0.23
SHMT2-226ENST00000556825 MALT1Q9UDY8 824 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 PCDHGA2Q9Y5H1 932 aa13.62□□□□□ -0.23
SHMT2-226ENST00000556825 NHSQ6T4R5 1651 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 hCG_1807616A0A1W2PRN6 198 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 NME4O00746 187 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 SLC30A4O14863 429 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 HDCP19113 662 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 HOXA6P31267 233 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 GSTM5P46439 218 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 GLUD2P49448 558 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 RARRES1P49788 294 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 VAMP7P51809 220 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 FCGRTP55899 365 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 RAB25P57735 213 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 FASTKQ14296 549 aaKnown RBP13.61□□□□□ -0.23
SHMT2-226ENST00000556825 ETFDHQ16134 617 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 MICAQ29983 383 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 PAN2Q504Q3 1202 aaKnown RBP13.61□□□□□ -0.23
SHMT2-226ENST00000556825 AGKQ53H12 422 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 PPM1JQ5JR12 505 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 SLC6A19Q695T7 634 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 SUSD1Q6UWL2 747 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 RBM23Q86U06 439 aaKnown RBP13.61□□□□□ -0.23
SHMT2-226ENST00000556825 NLRP8Q86W28 1048 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 KBTBD8Q8NFY9 601 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 HEXDCQ8WVB3 486 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 MFSD3Q96ES6 412 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 WBP1Q96G27 269 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 MRPL48Q96GC5 212 aaKnown RBP13.61□□□□□ -0.23
SHMT2-226ENST00000556825 EXOC2Q96KP1 924 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 SORCS2Q96PQ0 1159 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 SLC30A3Q99726 388 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 DUSP21Q9H596 190 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 UBQLN2Q9UHD9 624 aa13.61□□□□□ -0.23
SHMT2-226ENST00000556825 ADGRA2Q96PE1 1338 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms