RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SLC40A1Q9NP59 571 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 BFARQ9NZS9 450 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 TMEM9Q9P0T7 183 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 PDP2Q9P2J9 529 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 PISDQ9UG56 409 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 SLC2A6Q9UGQ3 507 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 ACSL5Q9ULC5 683 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 PCDHGA7Q9Y5G6 932 aa11.3□□□□□ -0.6
SLIRP-205ENST00000556310 MN1Q10571 1320 aaPredicted RBP11.3□□□□□ -0.6
SLIRP-205ENST00000556310 C17orf113A0A1B0GUU1 675 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 QSOX1O00391 747 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF185O15231 689 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 KRT37O76014 449 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 AP2A2O94973 939 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 GOT2P00505 430 aaKnown RBP11.29□□□□□ -0.6
SLIRP-205ENST00000556310 GSTM1P09488 218 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 SLC35G4P0C7Q5 338 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 MTHFD1P11586 935 aaKnown RBP11.29□□□□□ -0.6
SLIRP-205ENST00000556310 NSG1P42857 185 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 MAPK9P45984 424 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 NPY2RP49146 381 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 GNG11P61952 73 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 PRAMEP78395 509 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 GSTM4Q03013 218 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 KCNC4Q03721 635 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 CCDC173Q0VFZ6 552 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 GPR18Q14330 331 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 RPE65Q16518 533 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 LYPLAL1Q5VWZ2 237 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 ARMC3Q5W041 872 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 LRRC8BQ6P9F7 803 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 LRRC69Q6ZNQ3 347 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 RCBTB1Q8NDN9 531 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 GPR150Q8NGU9 434 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 GRK7Q8WTQ7 553 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 NCSTNQ92542 709 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 SGSM3Q96HU1 749 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 WWP1Q9H0M0 922 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 MRM3Q9HC36 420 aaKnown RBP11.29□□□□□ -0.6
SLIRP-205ENST00000556310 PRDM9Q9NQV7 894 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 IMP3Q9NV31 184 aaKnown RBP11.29□□□□□ -0.6
SLIRP-205ENST00000556310 FAM8A1Q9UBU6 413 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 PSMD13Q9UNM6 376 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 NEU2Q9Y3R4 380 aa11.29□□□□□ -0.6
SLIRP-205ENST00000556310 TCRBV7S3A2A0A539 114 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 TMEM63AO94886 807 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 UBXN7O94888 489 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 ITIH1P19827 911 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 MGAT1P26572 445 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 ABCG1P45844 678 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 CAPZBP47756 277 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 CRADDP78560 199 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 SARNPP82979 210 aaKnown RBP11.28□□□□□ -0.6
SLIRP-205ENST00000556310 KCTD19Q17RG1 926 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-205ENST00000556310 ZNF658BQ4V348 819 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-205ENST00000556310 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
SLIRP-205ENST00000556310 PAPD7Q5XG87 772 aaKnown RBP11.28□□□□□ -0.6
SLIRP-205ENST00000556310 CERS6Q6ZMG9 384 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 JAMLQ86YT9 394 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 PLXDC1Q8IUK5 500 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 LILRA3Q8N6C8 439 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-205ENST00000556310 CLDN19Q8N6F1 224 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 AGBL5Q8NDL9 886 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 OR6P1Q8NGX9 317 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 OR4L1Q8NH43 312 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 KCNE4Q8WWG9 221 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 C12orf66Q96MD2 445 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 TTC1Q99614 292 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 NAPGQ99747 312 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-205ENST00000556310 CCM2Q9BSQ5 444 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 B3GNT4Q9C0J1 378 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 CHRAC1Q9NRG0 131 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 SYBUQ9NX95 663 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 OGFRQ9NZT2 677 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 ACSL6Q9UKU0 697 aa11.28□□□□□ -0.6
SLIRP-205ENST00000556310 PRAMEF33A0A0G2JMD5 474 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 F8W8V4 182 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 AGRPO00253 132 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 NVLO15381 856 aaKnown RBP11.27□□□□□ -0.61
SLIRP-205ENST00000556310 C9P02748 559 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 FTH1P02794 183 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 ANKRD34CP0C6C1 535 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 MLNP12872 115 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 TYRP1P17643 537 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 MPSTP25325 297 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 SLC5A2P31639 672 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 CSTF2P33240 577 aaKnown RBP eCLIP11.27□□□□□ -0.611e-6■□□□□ 10.6
SLIRP-205ENST00000556310 PPARGP37231 505 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-205ENST00000556310 ETV5P41161 510 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 MAPK10P53779 464 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 GFERP55789 205 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 RPA4Q13156 261 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 FASTKD1Q53R41 847 aaKnown RBP11.27□□□□□ -0.61
SLIRP-205ENST00000556310 ANKRD22Q5VYY1 191 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
SLIRP-205ENST00000556310 CAPRIN2Q6IMN6 1127 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms