RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 NSUN2Q08J23 767 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PWP1Q13610 501 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RAPSNQ13702 412 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 KIR2DS5Q14953 304 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RAB6CQ53S08 254 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 MIIPQ5JXC2 388 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF658Q5TYW1 1059 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 CACHD1Q5VU97 1274 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 LYPLAL1Q5VWZ2 237 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 IZUMO3Q5VZ72 239 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 DENND2CQ68D51 928 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 GJB7Q6PEY0 223 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 IGFL3Q6UXB1 125 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF517Q6ZMY9 492 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 Q6ZS92 163 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 TMEM26Q6ZUK4 368 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 Q6ZVL8 140 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PRSS42Q7Z5A4 293 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 HSD11B1LQ7Z5J1 315 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 TECPR1Q7Z6L1 1165 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 UMODL1-AS1Q8N2C9 162 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 ZBTB2Q8N680 514 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PAF1Q8N7H5 531 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 AVL9Q8NBF6 648 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 FNIP1Q8TF40 1166 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 SHC3Q92529 594 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 INPP5DQ92835 1189 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 HDAC11Q96DB2 347 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RHOVQ96L33 236 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 NSMCE3Q96MG7 304 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 TRIM8Q9BZR9 551 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 ILKAPQ9H0C8 392 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RAB6CQ9H0N0 254 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PDFQ9HBH1 243 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 PLCB1Q9NQ66 1216 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RMND1Q9NWS8 449 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 SEMA5BQ9P283 1151 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 REV1Q9UBZ9 1251 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 ZNHIT2Q9UHR6 403 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 RARRES3Q9UL19 164 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 SLC30A1Q9Y6M5 507 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 ABCA4P78363 2273 aa6.73□□□□□ -1.33
ATXN3-236ENST00000556220 A0A1W2PQ67 120 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 GOLGA8SH3BPF8 625 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 E2F3O00716 465 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 HTRA2O43464 458 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 SNX2O60749 519 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 PRAMEF11O60813 436 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 DNAJC6O75061 913 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF202O95125 648 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 RAB40ALP0C0E4 278 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 F3P13726 295 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 FOLR1P15328 257 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 LHCGRP22888 699 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 HTR1EP28566 365 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 EPHB2P29323 1055 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 SSTR2P30874 369 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 VIPR1P32241 457 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 CDH5P33151 784 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF235Q14590 738 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF630Q2M218 657 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 C15orf59Q2T9L4 293 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 CCDC14Q49A88 953 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 CHST15Q7LFX5 561 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 CUZD1Q86UP6 607 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 TRIM74Q86UV6 250 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 FJX1Q86VR8 437 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 TRIM59Q8IWR1 403 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 ZADH2Q8N4Q0 377 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 TMEM35BQ8NCS4 154 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 MR1Q95460 341 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 RELTQ969Z4 430 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 ZDHHC12Q96GR4 267 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 SGSM3Q96HU1 749 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 SLC41A2Q96JW4 573 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 PLEKHG4BQ96PX9 1271 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 CHST8Q9H2A9 424 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 WASH6PQ9NQA3 447 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 EPHA6Q9UF33 1036 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 TCFL5Q9UL49 500 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 SNX7Q9UNH6 387 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 KCNK6Q9Y257 313 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 PRKAB1Q9Y478 270 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 PCYT1BQ9Y5K3 369 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-236ENST00000556220 JMJD1CQ15652 2540 aa6.72□□□□□ -1.33
ATXN3-236ENST00000556220 FOXN3O00409 490 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 KLHL41O60662 606 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 PALMO75781 387 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 HTR3BO95264 441 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ASMTLO95671 621 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 ALPPP05187 535 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 PYGLP06737 847 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 KLK3P07288 261 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CYP2A6P11509 494 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CD1EP15812 388 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 XRCC1P18887 633 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-236ENST00000556220 SLC9A1P19634 815 aa6.71□□□□□ -1.34
ATXN3-236ENST00000556220 CA5AP35218 305 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms