RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 DLSTP36957 453 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 ZNF75DP51815 510 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 VAV2P52735 878 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 HSD11B2P80365 405 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 GSTM4Q03013 218 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 TUBB3Q13509 450 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 SEPT6Q14141 434 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 PLCL1Q15111 1095 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 DNTTIP2Q5QJE6 756 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 KCTD11Q693B1 232 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 CAPRIN2Q6IMN6 1127 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 DARS2Q6PI48 645 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 SNX20Q7Z614 316 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 OOSP2Q86WS3 158 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 NXPE1Q8N323 547 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 TXLNBQ8N3L3 684 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 D2HGDHQ8N465 521 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 SIDT2Q8NBJ9 832 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 UBE2Q2Q8WVN8 375 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 ALG3Q92685 438 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 DCUN1D1Q96GG9 259 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 C12orf66Q96MD2 445 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 INSM2Q96T92 566 aaPredicted RBP12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 COPS8Q99627 209 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 TBL1YQ9BQ87 522 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 LATS2Q9NRM7 1088 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 IMP3Q9NV31 184 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 SLC24A2Q9UI40 661 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 FKBPLQ9UIM3 349 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 CROTQ9UKG9 612 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 RARRES3Q9UL19 164 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 PADI1Q9ULC6 663 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 PSMD13Q9UNM6 376 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 REXO2Q9Y3B8 237 aaKnown RBP12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 DUSP10Q9Y6W6 482 aa12.4□□□□□ -0.42
HNRNPC-221ENST00000555883 TRBV5-4A0A0C4DH59 114 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 GOLGA6L9A6NEM1 432 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 LDB2O43679 373 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 ZBTB11O95625 1053 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 PRKAR1AP10644 381 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 ATP1B2P14415 290 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 FOLR1P15328 257 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 F8A1P23610 371 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 PSMA3P25788 255 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 NAP1L1P55209 391 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 TUBB4BP68371 445 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 RPA4Q13156 261 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 KLF1Q13351 362 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 TUBB2AQ13885 445 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 PTPRCAPQ14761 206 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 PARP6Q2NL67 630 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 ZNF658BQ4V348 819 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 SYCE1Q8N0S2 351 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 UBL4BQ8N7F7 174 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 GALNT6Q8NCL4 622 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 OR13C4Q8NGS5 318 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 C9orf43Q8TAL5 461 aaPredicted RBP12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 CCDC110Q8TBZ0 833 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 MAP3K3Q99759 626 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 TUBB2BQ9BVA1 445 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 GPR87Q9BY21 358 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 WWP1Q9H0M0 922 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 C10orf88Q9H8K7 445 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 VPS37BQ9H9H4 285 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 LHX9Q9NQ69 397 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 FGF21Q9NSA1 209 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 HRASLS2Q9NWW9 162 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 CRLS1Q9UJA2 301 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 BTRCQ9Y297 605 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 KCNMB2Q9Y691 235 aa12.39□□□□□ -0.43
HNRNPC-221ENST00000555883 UBA6A0AVT1 1052 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 GRID2IPA4D2P6 1211 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 CASRP41180 1078 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 CD151P48509 253 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 PPP1CAP62136 330 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 NFKB2Q00653 900 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 P3H1Q32P28 736 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 PWWP2BQ6NUJ5 590 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 RAD9BQ6WBX8 426 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 ZNF517Q6ZMY9 492 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 DET1Q7L5Y6 550 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 ACVR1CQ8NER5 493 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 RMDN2Q96LZ7 410 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 LRFN5Q96NI6 719 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 APOL2Q9BQE5 337 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 LRRC40Q9H9A6 602 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 SYTL2Q9HCH5 934 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 C1GALT1Q9NS00 363 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 ZDHHC3Q9NYG2 299 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 AMFRQ9UKV5 643 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 POLHQ9Y253 713 aa12.38□□□□□ -0.43
HNRNPC-221ENST00000555883 SPENQ96T58 3664 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-221ENST00000555883 QSOX1O00391 747 aa12.37□□□□□ -0.43
HNRNPC-221ENST00000555883 PSMD3O43242 534 aa12.37□□□□□ -0.43
HNRNPC-221ENST00000555883 CPNE3O75131 537 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-221ENST00000555883 CREG1O75629 220 aa12.37□□□□□ -0.43
HNRNPC-221ENST00000555883 TIAF1O95411 115 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms