RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 NCDNQ9UBB6 729 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 GALPQ9UBC7 116 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 TBK1Q9UHD2 729 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 PCOLCE2Q9UKZ9 415 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 DNAJC16Q9Y2G8 782 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 PLEKHM1Q9Y4G2 1056 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 WDFY4Q6ZS81 3184 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF106Q9H2Y7 1883 aaKnown RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 FANCMQ8IYD8 2048 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 GOLGA6L10A6NI86 522 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 SMIM23A6NLE4 172 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 LMO7DNF2Z398 122 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 TPP1O14773 563 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 SCAMP1O15126 338 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ALDOAP04075 364 aaKnown RBP12.22□□□□□ -0.45
SHMT2-221ENST00000555773 MPOP05164 745 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 MYZAPP0CAP1 466 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF883P0CG24 379 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 KRT15P19012 456 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 PBLDP30039 288 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ACTR1BP42025 376 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 MAGEA12P43365 314 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 MAPK9P45984 424 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 CSRP3P50461 194 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 CCT8P50990 548 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 IL2P60568 153 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ACTR1AP61163 376 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 C1orf61Q13536 156 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 BOP1Q14137 746 aaKnown RBP12.22□□□□□ -0.45
SHMT2-221ENST00000555773 NFE2L1Q14494 772 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 GBX1Q14549 363 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 SUZ12Q15022 739 aaKnown RBP12.22□□□□□ -0.45
SHMT2-221ENST00000555773 SHBQ15464 509 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 PLA2G4EQ3MJ16 856 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 AGAP9Q5VTM2 703 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 PAQR3Q6TCH7 311 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ABRAXAS1Q6UWZ7 409 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 NEK10Q6ZWH5 1172 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 RAPH1Q70E73 1250 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 CEP97Q8IW35 865 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 SLC22A15Q8IZD6 547 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF548Q8NEK5 533 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-221ENST00000555773 GLMNQ92990 594 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 PGM2Q96G03 612 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 STMN4Q9H169 189 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ACBD3Q9H3P7 528 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 CAB39LQ9H9S4 337 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 SNX15Q9NRS6 342 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-221ENST00000555773 DOLKQ9UPQ8 538 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 CDYLQ9Y232 598 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 KCNK6Q9Y257 313 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 ACOT9Q9Y305 439 aa12.22□□□□□ -0.45
SHMT2-221ENST00000555773 A0A087X1B8 175 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 OR5K4A6NMS3 321 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 IFRD1O00458 451 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 YY2O15391 372 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 RGS16O15492 202 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 PCDHGA12O60330 932 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 RFPL1O75677 317 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 WISP3O95389 354 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 C2P06681 752 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 ANXA6P08133 673 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 MPC1LP0DKB6 136 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 COL6A2P12110 1019 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 SLC2A4P14672 509 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 AK4P27144 223 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 EPHA8P29322 1005 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 BNIP3Q12983 259 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 CCDC6Q16204 474 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 UAP1L1Q3KQV9 507 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 TAF1BQ53T94 588 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 ACSBG2Q5FVE4 666 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 CAPRIN2Q6IMN6 1127 aaKnown RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 SLC30A9Q6PML9 568 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 TMEM207Q6UWW9 146 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 FAM83HQ6ZRV2 1179 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 PIM3Q86V86 326 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 LCA5Q86VQ0 697 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 CYP4X1Q8N118 509 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 SLC25A45Q8N413 288 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 GIMAP7Q8NHV1 300 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 CCL4L1Q8NHW4 92 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 SAP25Q8TEE9 199 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 MZB1Q8WU39 189 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 FAM136AQ96C01 138 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 SLC30A3Q99726 388 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 GTPBP2Q9BX10 602 aaKnown RBP12.21□□□□□ -0.45
SHMT2-221ENST00000555773 OR52A5Q9H2C5 316 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 OSGEPL1Q9H4B0 414 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 SMOC1Q9H4F8 434 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 FSCN3Q9NQT6 498 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 SEMA4GQ9NTN9 838 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 TAAR2Q9P1P5 351 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 CTNNAL1Q9UBT7 734 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 TBC1D29Q9UFV1 150 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 PCDHGB2Q9Y5G2 931 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 ST14Q9Y5Y6 855 aa12.21□□□□□ -0.45
SHMT2-221ENST00000555773 CEP192Q8TEP8 1941 aa12.2□□□□□ -0.46
SHMT2-221ENST00000555773 A0A096LPK6 155 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms