RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 IL7RP16871 459 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 JUNDP17535 347 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 HLA-DPA1P20036 260 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ZFP36L2P47974 494 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SUOXP51687 545 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ISL1P61371 349 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 TUBA1BP68363 451 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 FAM189BP81408 668 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 RING1Q06587 406 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC10A7Q0GE19 358 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 LCP2Q13094 533 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 FADDQ13158 208 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 CRHR2Q13324 411 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 GEN1Q17RS7 908 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ZIK1Q3SY52 487 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 RABL3Q5HYI8 236 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SYT6Q5T7P8 510 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ATAD3BQ5T9A4 648 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 CCSAPQ6IQ19 270 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 TUBA1AQ71U36 451 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 KDELC2Q7Z4H8 507 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC22A16Q86VW1 577 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 IFNEQ86WN2 208 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 GALNT13Q8IUC8 556 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 RNF135Q8IUD6 432 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 KIAA1958Q8N8K9 716 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 FAR1Q8WVX9 515 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 RORBQ92753 470 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF599Q96NL3 588 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF300Q96RE9 604 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 MBOAT4Q96T53 435 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 DGCR6LQ9BY27 220 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 TFB2MQ9H5Q4 396 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ALG9Q9H6U8 611 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 CCNB1IP1Q9NPC3 277 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 TLR8Q9NR97 1041 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SACM1LQ9NTJ5 587 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 NPAP1Q9NZP6 1156 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 NUDT5Q9UKK9 219 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ERVW-1Q9UQF0 538 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ILVBLA1L0T0 632 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 LSM1O15116 133 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 DYRK3O43781 588 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 RAMP2O60895 175 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 UPK1BO75841 260 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 S1PR4O95977 384 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 CHEK2O96017 543 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 C1RP00736 705 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 FGF1P05230 155 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC10A3P09131 477 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ITGAMP11215 1152 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 COL6A1P12109 1028 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 CD1DP15813 335 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 NCK1P16333 377 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 GGT1P19440 569 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 EIF2DP41214 584 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 MTHFRP42898 656 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 DSC2Q02487 901 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 CD47Q08722 323 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 EFEMP1Q12805 493 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 DDR2Q16832 855 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 PYCR3Q53H96 274 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 XKR7Q5GH72 579 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SIRPB2Q5JXA9 342 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 SULT1C3Q6IMI6 304 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 RPS27LQ71UM5 84 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 PIWIL3Q7Z3Z3 882 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ZBTB46Q86UZ6 589 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 P2RY8Q86VZ1 359 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 PTGR2Q8N8N7 351 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 OR8J3Q8NGG0 315 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 OR6P1Q8NGX9 317 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ARRDC2Q8TBH0 407 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 GIPC2Q8TF65 315 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ANKRD49Q8WVL7 239 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 DACH2Q96NX9 599 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 FAM193BQ96PV7 902 aaPredicted RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 C1QTNF3Q9BXJ4 246 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 POLR1EQ9GZS1 481 aaKnown RBP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 TUBB1Q9H4B7 451 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF229Q9UJW7 825 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 TPRKBQ9Y3C4 175 aa10.54□□□□□ -0.72
MTHFD1-210ENST00000555252 LOC100130705A0A1B0GUX0 176 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 FAM172BPA6NC97 362 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MOXD2PA6NHM9 499 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 CLDN24A6NM45 220 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 TTC34A8MYJ7 566 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 SEC24AO95486 1093 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 GLP2RO95838 553 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MT-CO1P00395 513 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 IGLV3-27P01718 113 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ATXN1LP0C7T5 689 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 HAPLN1P10915 354 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 IL1RNP18510 177 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 CHRM3P20309 590 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 OGNP20774 298 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 FDXRP22570 491 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms