RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ART1P52961 327 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 RUNX1T1Q06455 604 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 TFCP2Q12800 502 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 TNIP1Q15025 636 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 IRAK1BP1Q5VVH5 260 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 CENPVQ7Z7K6 275 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 ANKRD23Q86SG2 305 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 SATL1Q86VE3 508 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZNF595Q8IYB9 648 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 NKAIN3Q8N8D7 197 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 PI4KAP1Q8N8J0 262 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 BBS10Q8TAM1 723 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 MRPS27Q92552 414 aaKnown RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 SECISBP2LQ93073 1101 aaKnown RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 THOC3Q96J01 351 aaKnown RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 LINC00615Q96LM1 132 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZNF582Q96NG8 517 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 SEPHS2Q99611 448 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 C16orf70Q9BSU1 422 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 NAA11Q9BSU3 229 aaPredicted RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 SLC25A23Q9BV35 468 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 OPA3Q9H6K4 179 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 CNOT10Q9H9A5 744 aaKnown RBP5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 EBF2Q9HAK2 575 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 CD93Q9NPY3 652 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 DPP3Q9NY33 737 aa5.2□□□□□ -1.58
CKS1BP1-201ENST00000555221 IGHV4OR15-8A0A075B7B6 117 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 HEPACAM2A8MVW5 462 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 XRCC3O43542 346 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 RECQL5O94762 991 aaPredicted RBP5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 PAPSS2O95340 614 aaPredicted RBP5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 DANCRP0C864 163 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 HLA-DOBP13765 273 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 AHRP35869 848 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 SLC9A3P48764 834 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 PDLIM4P50479 330 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 TERF1P54274 439 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZXDBP98169 803 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZBTB17Q13105 803 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 KRT39Q6A163 491 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 NADSYN1Q6IA69 706 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 KLC3Q6P597 504 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 UNQ6126/PRO20091Q6UXV3 157 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 THNSL1Q8IYQ7 743 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZNF441Q8N8Z8 693 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 Q8N9P0 234 aaPredicted RBP5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 OR2AJ1Q8NGZ0 328 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 KIF18AQ8NI77 898 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 LNX1Q8TBB1 728 aaPredicted RBP5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 SLAMF9Q96A28 289 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 ABHD8Q96I13 439 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 DUX5Q96PT3 197 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 SPAG5Q96R06 1193 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 MEIS3Q99687 375 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 OLFM1Q99784 485 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 FNDC11Q9BVV2 318 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 SLA2Q9H6Q3 261 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 MIOSQ9NXC5 875 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 NPAP1Q9NZP6 1156 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 RHCGQ9UBD6 479 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 TAF1P21675 1872 aa5.19□□□□□ -1.58
CKS1BP1-201ENST00000555221 SAA2-SAA4A0A096LPE2 208 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 PRSS51A0A1B0GVH4 220 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 MED19A0JLT2 244 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 ELOVL7A1L3X0 281 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 DIAPH2O60879 1101 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 WISP2O76076 250 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 PDE9AO76083 593 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 ZBTB11O95625 1053 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 OR2T7P0C7T2 308 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 CDH1P12830 882 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 FDPSP14324 419 aaKnown RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 EEF1B2P24534 225 aaKnown RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 PTAFRP25105 342 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 ARCN1P48444 511 aaKnown RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 NANOS2P60321 138 aaKnown RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 ROR1Q01973 937 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 TROAPQ12815 778 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 ASPRV1Q53RT3 343 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 RNASEH2BQ5TBB1 312 aaKnown RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 IL27RAQ6UWB1 636 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 FAM198BQ6UWH4 519 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 RAD9BQ6WBX8 426 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 ERN2Q76MJ5 926 aaKnown RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 DET1Q7L5Y6 550 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 PPFIBP2Q8ND30 876 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 SEMA4DQ92854 862 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 SIPA1Q96FS4 1042 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 OXNAD1Q96HP4 312 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 GBP5Q96PP8 586 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 SLX1AQ9BQ83 275 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 LMF2Q9BU23 707 aaKnown RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 ABHD6Q9BV23 337 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 CSTL1Q9H114 145 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 DPAGT1Q9H3H5 408 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 C6orf106Q9H6K1 298 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 KLHL1Q9NR64 748 aa5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 PRMT7Q9NVM4 692 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP1-201ENST00000555221 RALYQ9UKM9 306 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms