RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TMEM109Q9BVC6 243 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 NLGN3Q9NZ94 848 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 TAAR2Q9P1P5 351 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 PSMC3IPQ9P2W1 217 aaPredicted RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 TRMT6Q9UJA5 497 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 DNAJC16Q9Y2G8 782 aa16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 MTO1Q9Y2Z2 717 aaKnown RBP16.13■□□□□ 0.17
SPTLC2-203ENST00000554901 OR5K4A6NMS3 321 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 YY2O15391 372 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 SDC3O75056 442 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 CDH16O75309 829 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM155BO75949 473 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 SLCO2B1O94956 709 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 SHBGP04278 402 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 CBSLP0DN79 551 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 ENO3P13929 434 aaPredicted RBP16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 AK4P27144 223 aaPredicted RBP16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 GCAP28676 217 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 CBSP35520 551 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 ABCG1P45844 678 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 CDKN2DP55273 166 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 IFFO1Q0D2I5 559 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 BOP1Q14137 746 aaKnown RBP16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 NFE2L1Q14494 772 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 LRRC8EQ6NSJ5 796 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC30A9Q6PML9 568 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 CROCCP2Q86T23 111 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 IQCKQ8N0W5 287 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 DCLK2Q8N568 766 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 CD200R1Q8TD46 325 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 MRRFQ96E11 262 aaKnown RBP16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 GPR21Q99679 349 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 OSGEPL1Q9H4B0 414 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 UCKL1Q9NWZ5 548 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 PLEKHM1Q9Y4G2 1056 aa16.12■□□□□ 0.17
SPTLC2-203ENST00000554901 TMEM131Q92545 1883 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 UQCRHLA0A096LP55 91 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 IQANK1A0A1B0GTG1 560 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 A6NCN8 305 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 FLRT2O43155 660 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 UQCRHP07919 91 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 CELA2BP08218 269 aaPredicted RBP16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 SNRPAP09012 282 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 F3P13726 295 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 STMN1P16949 149 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 ITGB6P18564 788 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 HALP42357 657 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 TIAL1Q01085 375 aaKnown RBP eCLIP16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 HSPA14Q0VDF9 509 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 PDAP1Q13442 181 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 USP10Q14694 798 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 UAP1L1Q3KQV9 507 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 OGFOD3Q6PK18 319 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 XKR5Q6UX68 686 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM83HQ6ZRV2 1179 aaPredicted RBP16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC22A15Q8IZD6 547 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 AVL9Q8NBF6 648 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM46DQ8NEK8 389 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 OR4C6Q8NH72 309 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 ISL2Q96A47 359 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 SYTL2Q9HCH5 934 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 SARS2Q9NP81 518 aaKnown RBP16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 NCKIPSDQ9NZQ3 722 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 TBC1D29Q9UFV1 150 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 RAPGEFL1Q9UHV5 662 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC39A10Q9ULF5 831 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 CDYLQ9Y232 598 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 PLAAQ9Y263 795 aa16.11■□□□□ 0.17
SPTLC2-203ENST00000554901 SLC35G4P0C7Q5 338 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 GIMD1P0DJR0 217 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 CRABP2P29373 138 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 GRK6P43250 576 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 MAPK9P45984 424 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 RGS4P49798 205 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 LIMK1P53667 647 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 TAS2R39P59534 338 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 RAB10P61026 200 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 IL9RQ01113 521 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 ZKSCAN8Q15776 578 aaPredicted RBP16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 C6orf132Q5T0Z8 1188 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 MROH9Q5TGP6 573 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 LRIG3Q6UXM1 1119 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 NEK10Q6ZWH5 1172 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 FAM181AQ8N9Y4 354 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 OR2I1PQ8NGU4 316 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 OLFM1Q99784 485 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 OR52A5Q9H2C5 316 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 NFS1Q9Y697 457 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 LAMA1P25391 3075 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 ADAMTS9Q9P2N4 1935 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 ZNF292O60281 2723 aa16.1■□□□□ 0.17
SPTLC2-203ENST00000554901 KIR2DS5A0A0G2JLQ3 304 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 A0A0G2JNG1 304 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 HMX2A2RU54 273 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 PDZK1P1A8MUH7 402 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 KIR2DS3K7RE56 304 aa16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 IFRD1O00458 451 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-203ENST00000554901 RASGRF2O14827 1237 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms