RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 PLEKHM1Q9Y4G2 1056 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 PCDHGA8Q9Y5G5 932 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 ST14Q9Y5Y6 855 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 OAS3Q9Y6K5 1087 aaKnown RBP12.26□□□□□ -0.45
SHMT2-214ENST00000554604 IKBKGQ9Y6K9 419 aa12.26□□□□□ -0.45
SHMT2-214ENST00000554604 A0A1W2PPM1 405 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 SDR42E2A6NKP2 422 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 FAM159BA6NKW6 160 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 TNFSF15O95150 251 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 CD68P34810 354 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-214ENST00000554604 PPM1FP49593 454 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-214ENST00000554604 PDX1P52945 283 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 DCDC1P59894 354 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 EIF3IQ13347 325 aaKnown RBP12.25□□□□□ -0.45
SHMT2-214ENST00000554604 NAB1Q13506 487 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 SPARCL1Q14515 664 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 LGSNQ5TDP6 509 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 IGF2-ASQ6U949 168 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 C6orf89Q6UWU4 347 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 RGS9BPQ6ZS82 235 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 YTHDF3Q7Z739 585 aaKnown RBP12.25□□□□□ -0.45
SHMT2-214ENST00000554604 PIGWQ7Z7B1 504 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 PIM3Q86V86 326 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 LRRC6Q86X45 466 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 NAGSQ8N159 534 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 SLC25A41Q8N5S1 370 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 GPR26Q8NDV2 337 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 IPMKQ8NFU5 416 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 MGARPQ8TDB4 240 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 PATE1Q8WXA2 126 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 EID2BQ96D98 161 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 STAMBPL1Q96FJ0 436 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 SLC46A1Q96NT5 459 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 FSD1LQ9BXM9 530 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 RMI1Q9H9A7 625 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 ASCL3Q9NQ33 180 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 CNOT6Q9ULM6 557 aaKnown RBP12.25□□□□□ -0.45
SHMT2-214ENST00000554604 ATRXP46100 2492 aa12.25□□□□□ -0.45
SHMT2-214ENST00000554604 A0A1W2PNU3 283 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 AP3B1O00203 1094 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 PLD2O14939 933 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 TM9SF1O15321 606 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 DNAJC6O75061 913 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 SPAG7O75391 227 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 CPNE6O95741 557 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 AP2A1O95782 977 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 EPOP01588 193 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 JMJD7P0C870 316 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 BPIP17213 487 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 PGAM1P18669 254 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 CCKBRP32239 447 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 GRIA1P42261 906 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MLLT3P42568 568 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 GPR3P46089 330 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 SERPINB9P50453 376 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 WDR4P57081 412 aaKnown RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 OR1D5P58170 312 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 SLC18A2Q05940 514 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MPP3Q13368 585 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 FRG1Q14331 258 aaKnown RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 ITIH4Q14624 930 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 SIRPB2Q5JXA9 342 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 PHF19Q5T6S3 580 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 BROXQ5VW32 411 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 KCTD11Q693B1 232 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 PDPK2PQ6A1A2 396 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 ZNF449Q6P9G9 518 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 KDELC1Q6UW63 502 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 RAB11FIP2Q7L804 512 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 C17orf82Q86X59 251 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 PHYKPLQ8IUZ5 450 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MPP5Q8N3R9 675 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 FBXO39Q8N4B4 442 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 TRAM1L1Q8N609 369 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 KCNE4Q8WWG9 221 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 GLYATL1Q969I3 302 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MTBPQ96DY7 904 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MRRFQ96E11 262 aaKnown RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 OXNAD1Q96HP4 312 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 PPP1R2P1Q96PQ5 205 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 FCRL5Q96RD9 977 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 GORASP1Q9BQQ3 440 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 ZMYND15Q9H091 742 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 OR2AG1Q9H205 316 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 RDH14Q9HBH5 336 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 BPIFA1Q9NP55 256 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 CASS4Q9NQ75 786 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MOCS1Q9NZB8 636 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 HACD3Q9P035 362 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 NFKBIL1Q9UBC1 381 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 RRP15Q9Y3B9 282 aaKnown RBP12.24□□□□□ -0.45
SHMT2-214ENST00000554604 SPO11Q9Y5K1 396 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MAD1L1Q9Y6D9 718 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 FAM169AQ9Y6X4 670 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 MGAQ8IWI9 3026 aa12.24□□□□□ -0.45
SHMT2-214ENST00000554604 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 LOC285095A0A1B0GVY8 99 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 PMS2P1A4D2B8 440 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 AGRPO00253 132 aa12.23□□□□□ -0.45
SHMT2-214ENST00000554604 AURKAO14965 403 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms