RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 LPIN1Q14693 890 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ABCB5Q2M3G0 1257 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ZC2HC1CQ53FD0 456 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 BRMS1LQ5PSV4 323 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 HES5Q5TA89 166 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 FAM205BPQ63HN1 556 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PLEKHA7Q6IQ23 1121 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RWDD4Q6NW29 188 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PRMT9Q6P2P2 845 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PSRC1Q6PGN9 363 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PAPD4Q6PIY7 484 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 C4orf50Q6ZRC1 276 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RBM43Q6ZSC3 357 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 FRA10AC1Q70Z53 315 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 EPM2AIP1Q7L775 607 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 GALNTL5Q7Z4T8 443 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 LRRC6Q86X45 466 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 KIAA0319LQ8IZA0 1049 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 NKAPQ8N5F7 415 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 SH2D3CQ8N5H7 860 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ARFGAP1Q8N6T3 406 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PCYOX1LQ8NBM8 494 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ZBTB44Q8NCP5 570 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CCDC197Q8NCU1 140 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 SRFBP1Q8NEF9 429 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 TMIEQ8NEW7 156 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CHPT1Q8WUD6 406 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 KCTD4Q8WVF5 259 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 WASF1Q92558 559 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 USP7Q93009 1102 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RFKQ969G6 155 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MYDGFQ969H8 173 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 TMIGD2Q96BF3 282 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ZDHHC12Q96GR4 267 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MARS2Q96GW9 593 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 B3GALT6Q96L58 329 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF578Q96N58 590 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 BIRC8Q96P09 236 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PIGSQ96S52 555 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 BARD1Q99728 777 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MYD88Q99836 296 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ELAC2Q9BQ52 826 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 C19orf43Q9BQ61 176 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 NUP85Q9BW27 656 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 HEMGNQ9BXL5 484 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 GPR61Q9BZJ8 451 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 DCLK3Q9C098 648 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 POLR1EQ9GZS1 481 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RAB17Q9H0T7 212 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 GORASP2Q9H8Y8 452 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 SLC28A3Q9HAS3 691 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 LZTFL1Q9NQ48 299 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RPRD1BQ9NQG5 326 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 DDX4Q9NQI0 724 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ARHGEF3Q9NR81 526 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 FAM114A2Q9NRY5 505 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 C20orf96Q9NUD7 363 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 DDX28Q9NUL7 540 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ZIM2Q9NZV7 527 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MORF4L1Q9UBU8 362 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 FAM153AQ9UHL3 310 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CYB5R1Q9UHQ9 305 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 TINAGQ9UJW2 476 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 AJAP1Q9UKB5 411 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PSME2Q9UL46 239 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ZBTB21Q9ULJ3 1066 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 DIMT1Q9UNQ2 313 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MTO1Q9Y2Z2 717 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 SNX14Q9Y5W7 946 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CYP46A1Q9Y6A2 500 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MTCH2Q9Y6C9 303 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PIAS3Q9Y6X2 628 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 SIP14410 1827 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 TANC1Q9C0D5 1861 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PTPRSQ13332 1948 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SIPA1L1O43166 1804 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 A0A1B0GVC2 190 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 MED19A0JLT2 244 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ILVBLA1L0T0 632 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 ZSCAN5CA6NGD5 496 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CGB1A6NKQ9 187 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 F8W8V4 182 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 hCG_2039718K7EN88 272 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TOR1AO14656 332 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CLOCKO15516 846 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 KRT86O43790 486 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PFKFB2O60825 505 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PQBP1O60828 265 aaKnown RBP4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CDH16O75309 829 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 SNAP29O95721 258 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 HSPA4LO95757 839 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 APOC1P02654 83 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 OPN1LWP04000 364 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 LYNP07948 512 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 TPBGLP0DKB5 382 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CYBAP13498 195 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 GJA1P17302 382 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 CXCR2P25025 360 aa4.38□□□□□ -1.71
ATXN3-227ENST00000554491 PCSK1P29120 753 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms