RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 PRKAR1AP10644 381 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 TEAD1P28347 426 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 TSPAN7P41732 249 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 ELK3P41970 407 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 RAB15P59190 212 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 GPLD1P80108 840 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 SQSTM1Q13501 440 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 DNAJC21Q5F1R6 531 aaKnown RBP13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 HP1BP3Q5SSJ5 553 aaPredicted RBP13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 TMEM71Q6P5X7 295 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 RFLNAQ6ZTI6 216 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 CENPUQ71F23 418 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 TRIM74Q86UV6 250 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 CCDC25Q86WR0 208 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 TTC30BQ8N4P2 665 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 CAVIN3Q969G5 261 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 SCRN2Q96FV2 425 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 RANBP9Q96S59 729 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 LYSMD1Q96S90 227 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 SLC38A3Q99624 504 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 CTRCQ99895 268 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 EPB41L4BQ9H329 900 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 ZNF106Q9H2Y7 1883 aaKnown RBP13.8□□□□□ -0.2
SPTLC2-202ENST00000554365 SDR42E2A6NKP2 422 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 AURKAO14965 403 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 NKX2-8O15522 239 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 LDB2O43679 373 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 DUX1O43812 170 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 ASMTLO95671 621 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 MAGEA4P43358 317 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 DPTQ07507 201 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 POU6F1Q14863 301 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 CCDC38Q502W7 563 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 EMBQ6PCB8 327 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 ADAMTSL4Q6UY14 1074 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 TECPR1Q7Z6L1 1165 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 ANKMY2Q8IV38 441 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 OR10G6Q8NH81 332 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 SLC37A2Q8TED4 501 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 SCAMP4Q969E2 229 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 KIAA1143Q96AT1 154 aaPredicted RBP13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 AP2M1Q96CW1 435 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 EID2BQ96D98 161 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 LRRC39Q96DD0 335 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 C9orf72Q96LT7 481 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 CATSPER2Q96P56 530 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 EBNA1BP2Q99848 306 aaKnown RBP13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 KIFC1Q9BW19 673 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 IL22Q9GZX6 179 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 ABCG8Q9H221 673 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 GPN2Q9H9Y4 310 aaPredicted RBP13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 ZNF71Q9NQZ8 489 aaPredicted RBP13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 NINJ2Q9NZG7 142 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 TUBD1Q9UJT1 453 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 PILRAQ9UKJ1 303 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 SOX13Q9UN79 622 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 CHMP2BQ9UQN3 213 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 TCAF1Q9Y4C2 921 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 KCTD3Q9Y597 815 aa13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 ZFC3H1O60293 1989 aaKnown RBP13.79□□□□□ -0.2
SPTLC2-202ENST00000554365 LOC101059948A0A1B0GTJ6 334 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 MROH6A6NGR9 719 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 INPP4BO15327 924 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 CAPN5O15484 640 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 SOD1P00441 154 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 PSMA3P25788 255 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 EPHB1P54762 984 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 GPX6P59796 221 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 UBAP2LQ14157 1087 aaKnown RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 UAP1Q16222 522 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 IGFBP7Q16270 282 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 PYCR3Q53H96 274 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 PCID2Q5JVF3 399 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 BEND6Q5SZJ8 279 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 STEAP4Q687X5 459 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 LRRC66Q68CR7 880 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 FBXO38Q6PIJ6 1188 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 MICALCLQ6ZW33 695 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 GALNT13Q8IUC8 556 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 UNC5BQ8IZJ1 945 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 NDUFAF2Q8N183 169 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 BMPERQ8N8U9 685 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 NLGN4YQ8NFZ3 816 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 C9orf43Q8TAL5 461 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 BRSK1Q8TDC3 778 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 NCSTNQ92542 709 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 STAMBPL1Q96FJ0 436 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 SCARF2Q96GP6 870 aaPredicted RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 SLC45A3Q96JT2 553 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 ZNF778Q96MU6 729 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 TEFMQ96QE5 360 aaKnown RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 TSPYL1Q9H0U9 437 aa13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 CDC42EP4Q9H3Q1 356 aaKnown RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 MRM3Q9HC36 420 aaKnown RBP13.78□□□□□ -0.2
SPTLC2-202ENST00000554365 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms