RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, human

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-204	ENST00000554062	HOXD3	P31249	432 aa	Predicted RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	ATP6V1E1	P36543	226 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	RFX2	P48378	723 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	AMPH	P49418	695 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	COMP	P49747	757 aa	Predicted RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	SNU13	P55769	128 aa	Known RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	STX1B	P61266	288 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	TUBB4B	P68371	445 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	UBE2V1	Q13404	147 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	RBMS2	Q15434	407 aa	Known RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	EFNB3	Q15768	340 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	FAM174B	Q3ZCQ3	159 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062		Q4G0T1	1027 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	ANKRD20A4	Q4UJ75	823 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	ANKRD20A8P	Q5CZ79	823 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	GLRA4	Q5JXX5	417 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	ANKRD20A2	Q5SQ80	823 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	ANKRD20A1	Q5TYW2	823 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	ANKRD20A3	Q5VUR7	823 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	C18orf63	Q68DL7	685 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	PRR27	Q6MZM9	219 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	ZBTB49	Q6ZSB9	765 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062		Q6ZSV7	163 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	OTOA	Q7RTW8	1153 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	HOOK3	Q86VS8	718 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	NRROS	Q86YC3	692 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	KLHL7	Q8IXQ5	586 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	C1orf52	Q8N6N3	182 aa	Known RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	MOB3A	Q96BX8	217 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	CHFR	Q96EP1	664 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	OR1F2P	Q96R84	312 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	OR6C1	Q96RD1	312 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	QTRT1	Q9BXR0	403 aa	Known RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	KCNN2	Q9H2S1	579 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	FOXP1	Q9H334	677 aa	Predicted RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	CACNG4	Q9UBN1	327 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	HEY2	Q9UBP5	337 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	DNAJB9	Q9UBS3	223 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	AMDHD2	Q9Y303	409 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	MAGI3	Q5TCQ9	1506 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	NUP153	P49790	1475 aa	Known RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	WDR7	Q9Y4E6	1490 aa		4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.54	□□□□□ -1.68
PABPN1-204	ENST00000554062	NCAN	O14594	1321 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	EFCAB5	A4FU69	1503 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	OR6C75	A6NL08	312 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062		J3QR06	171 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	SLC33A1	O00400	549 aa	Predicted RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	DNM1L	O00429	736 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	PRRG2	O14669	202 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	PLPP2	O43688	288 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	HTATSF1	O43719	755 aa	Known RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	LUC7L3	O95232	432 aa	Known RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	PNP	P00491	289 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	GBA	P04062	536 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	CELA2A	P08217	269 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	THEGL	P0DJG4	465 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	CYP19A1	P11511	503 aa	Predicted RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	DNASE1	P24855	282 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	MXI1	P50539	228 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	ARF5	P84085	180 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	TEF	Q10587	303 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	PLA2G7	Q13093	441 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	TWIST1	Q15672	202 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	PRTG	Q2VWP7	1150 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	TTC31	Q49AM3	519 aa	Predicted RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	KRTCAP3	Q53RY4	240 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	ZNF789	Q5FWF6	425 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	FNBP1L	Q5T0N5	605 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	GCNT6	Q5T4J0	391 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	TRNP1	Q6NT89	227 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	RGMB	Q6NW40	437 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	ENPP7	Q6UWV6	458 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	TLK2	Q86UE8	772 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	RYBP	Q8N488	228 aa	Predicted RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	NANOGP1	Q8N7R0	232 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	OR14A16	Q8NHC5	309 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	FAM216A	Q8WUB2	273 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	SPDL1	Q96EA4	605 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	GFI1	Q99684	422 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	PANK2	Q9BZ23	570 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	FN3K	Q9H479	309 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	POT1	Q9NUX5	634 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	ITGA11	Q9UKX5	1188 aa		4.53	□□□□□ -1.68
PABPN1-204	ENST00000554062	ZNF804B	A4D1E1	1349 aa		4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	CFAP43	Q8NDM7	1665 aa		4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062		A0A0U1RQJ8	604 aa		4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	MED19	A0JLT2	244 aa	Predicted RBP	4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	CLIC2	O15247	247 aa		4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	SPRY1	O43609	319 aa	Predicted RBP	4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	RBMXL2	O75526	392 aa	Known RBP	4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	LDLR	P01130	860 aa		4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	ZFY	P08048	801 aa	Predicted RBP	4.52	□□□□□ -1.69
PABPN1-204	ENST00000554062	OR52Z1	P0C646	297 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms