RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 CCDC88CQ9P219 2028 aa11.62□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SPENQ96T58 3664 aaKnown RBP11.62□□□□□ -0.55
TRAPPC6B-204ENST00000554018 UTP20O75691 2785 aaKnown RBP11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SLC28A2O43868 658 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ZNF189O75820 626 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SLC35G4P0C7Q5 338 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 PRSS56P0CW18 603 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 RALBP11234 206 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 NELFEP18615 380 aaKnown RBP11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ITGALP20701 1170 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 F8A1P23610 371 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 MC4RP32245 332 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 STAT5AP42229 794 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 GDF10P55107 478 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 IL11RAQ14626 422 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 KCNAB1Q14722 419 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 KLHL35Q6PF15 583 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 C6orf15Q6UXA7 325 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CERS6Q6ZMG9 384 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 PRICKLE2Q7Z3G6 844 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SNX20Q7Z614 316 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 RASGRP3Q8IV61 690 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 TXLNBQ8N3L3 684 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ESX1Q8N693 406 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SLC35B2Q8TB61 432 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ULK4Q96C45 1275 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 LRRC45Q96CN5 670 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 HES6Q96HZ4 224 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 LINC00615Q96LM1 132 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 COPS8Q99627 209 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 TMEM121Q9BTD3 319 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 FAM117AQ9C073 453 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 PIH1D1Q9NWS0 290 aaKnown RBP11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 HRASLS2Q9NWW9 162 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 IMPACTQ9P2X3 320 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 FEZ2Q9UHY8 353 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SLC24A2Q9UI40 661 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CAPN6Q9Y6Q1 641 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 RPS6KL1Q9Y6S9 549 aa11.61□□□□□ -0.55
TRAPPC6B-204ENST00000554018 OR5K3A6NET4 321 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SPAG6O75602 509 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 KIAA0754O94854 1291 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 EBLN1P0CF75 366 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SFTPCP11686 197 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 FGF5P12034 268 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ATP1B2P14415 290 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 FOLR1P15328 257 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CDC25BP30305 580 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 HADHAP40939 763 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ARCN1P48444 511 aaKnown RBP11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 PRLHRP49683 370 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 POLE2P56282 527 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SEPT6Q14141 434 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 MAP7Q14244 749 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 GSE1Q14687 1217 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 POU6F1Q14863 301 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 GPR33Q49SQ1 333 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ZRANB3Q5FWF4 1079 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 DNTTIP2Q5QJE6 756 aaKnown RBP11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CAPRIN2Q6IMN6 1127 aaKnown RBP11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 TAS2R42Q7RTR8 314 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SERPINA9Q86WD7 417 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 HM13Q8TCT9 377 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ATG4AQ8WYN0 398 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 UBXN4Q92575 508 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SLC41A2Q96JW4 573 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 MAP3K3Q99759 626 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 C19orf43Q9BQ61 176 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 EFHD1Q9BUP0 239 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 LRRC40Q9H9A6 602 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 NLE1Q9NVX2 485 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 GEMIN8Q9NWZ8 242 aaKnown RBP11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ZDHHC3Q9NYG2 299 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 SEMA5BQ9P283 1151 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 LNPEPQ9UIQ6 1025 aa11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 MRPS18BQ9Y676 258 aaKnown RBP11.6□□□□□ -0.55
TRAPPC6B-204ENST00000554018 RELNP78509 3460 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 IGLV3-16A0A075B6K0 115 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 TRBV5-4A0A0C4DH59 114 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CCDC78A2IDD5 438 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 KLHL33A6NCF5 533 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 OR6C74A6NCV1 312 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CFAP99D6REC4 459 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 TIAF1O95411 115 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 AP2A1O95782 977 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ACRV1P26436 265 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 OAS2P29728 719 aaKnown RBP11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 DLSTP36957 453 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CCR10P46092 362 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 CDC20Q12834 499 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 KRT33BQ14525 404 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 DEFB109BQ30KR1 87 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 P3H1Q32P28 736 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 ATP1A1-AS1Q5TC04 95 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 PWWP2BQ6NUJ5 590 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 C16orf46Q6P387 395 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 FBXO38Q6PIJ6 1188 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 PPP1R3BQ86XI6 285 aa11.59□□□□□ -0.55
TRAPPC6B-204ENST00000554018 PIANPQ8IYJ0 282 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms