RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SLC39A4Q6P5W5 647 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 TMEM108Q6UXF1 575 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 CRELD2Q6UXH1 353 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-223ENST00000553686 ABI3BPQ7Z7G0 1075 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 PARGQ86W56 976 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 CCDC117Q8IWD4 279 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-223ENST00000553686 BRSK2Q8IWQ3 736 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 SLC35F3Q8IY50 421 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 RAVER1Q8IY67 606 aaKnown RBP5.93□□□□□ -1.46
ATXN3-223ENST00000553686 SYT2Q8N9I0 419 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-223ENST00000553686 CCDC112Q8NEF3 446 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-223ENST00000553686 TTC17Q96AE7 1141 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 FAM136AQ96C01 138 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 PPP1R13BQ96KQ4 1090 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 FAM213AQ9BRX8 229 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 SPATA5L1Q9BVQ7 753 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 TTYH3Q9C0H2 523 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 LRRN3Q9H3W5 708 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 ASB6Q9NWX5 421 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 CLIC5Q9NZA1 410 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 SIX4Q9UIU6 781 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 ODF2LQ9ULJ1 636 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
ATXN3-223ENST00000553686 ANK1P16157 1881 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 MED13Q9UHV7 2174 aa5.93□□□□□ -1.46
ATXN3-223ENST00000553686 LRRC3CA6NJW4 275 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 LMO7DNF2Z398 122 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 H3BML4 177 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 M0QYT0 321 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 MASP2O00187 686 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 MDM4O15151 490 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 UBXN7O94888 489 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 UNC5CO95185 931 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 LUC7L3O95232 432 aaKnown RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 MOCS3O95396 460 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 SRPRAP08240 638 aaKnown RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 HMBSP08397 361 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 NR2F6P10588 404 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 TRIM21P19474 475 aaKnown RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 NR1D1P20393 614 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 DRD3P35462 400 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 RABIFP47224 123 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 TNNC1P63316 161 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 STK3Q13188 491 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 TRIM29Q14134 588 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 FZD2Q14332 565 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 TSTD2Q5T7W7 516 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 LVRNQ6Q4G3 990 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 EPM2AIP1Q7L775 607 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 PTAR1Q7Z6K3 402 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 DAAM2Q86T65 1068 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 HORMAD1Q86X24 394 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 FAM217AQ8IXS0 508 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 DIS3L2Q8IYB7 885 aaKnown RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 STK40Q8N2I9 435 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 SDR16C5Q8N3Y7 309 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 ARL10Q8N8L6 244 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 PPP1R35Q8TAP8 253 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 FAM131CQ96AQ9 280 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 FKBP10Q96AY3 582 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 TBATAQ96M53 351 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 SPAG5Q96R06 1193 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 MRPL45Q9BRJ2 306 aaKnown RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 PARVGQ9HBI0 331 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 ANLNQ9NQW6 1124 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 OSER1Q9NX31 292 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 RBAKQ9NYW8 714 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-223ENST00000553686 HESX1Q9UBX0 185 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 RASAL2Q9UJF2 1139 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 EXOC7Q9UPT5 735 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 PLEKHM1Q9Y4G2 1056 aa5.92□□□□□ -1.46
ATXN3-223ENST00000553686 MYLKQ15746 1914 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 NBEAL1Q6ZS30 2694 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 A0A1W2PQM1 296 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 LINC00473A8K010 186 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 TTC34A8MYJ7 566 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 PRSS44E7EML9 344 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 K7EM74 188 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 INPP4BO15327 924 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 RAD1O60671 282 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 LRCH4O75427 683 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 CD99P14209 185 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 PRLRP16471 622 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 OAS2P29728 719 aaKnown RBP5.91□□□□□ -1.46
ATXN3-223ENST00000553686 ZNF134P52741 427 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 MAP3K7CLP57077 242 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 CLDN2P57739 230 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 PTK2BQ14289 1009 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 IQCB1Q15051 598 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 ZRSR1Q15695 479 aaKnown RBP5.91□□□□□ -1.46
ATXN3-223ENST00000553686 TBCCQ15814 346 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 ZC3H3Q8IXZ2 948 aaKnown RBP5.91□□□□□ -1.46
ATXN3-223ENST00000553686 SLC22A18ASQ8N1D0 253 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 ARHGAP18Q8N392 663 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 RFKQ969G6 155 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 TIMP4Q99727 224 aa5.91□□□□□ -1.46
ATXN3-223ENST00000553686 ALG8Q9BVK2 526 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms