RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 DRD2P14416 443 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 CDH3P22223 829 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 CA4P22748 312 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 PSMA2P25787 234 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 SOX5P35711 763 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 CA7P43166 264 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 KIR3DL1P43629 444 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-204ENST00000553605 KHDC1Q4VXA5 237 aaKnown RBP13.41□□□□□ -0.26
PRPF39-204ENST00000553605 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 PRAMEF13Q5VWM6 474 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 PDPK2PQ6A1A2 396 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 TRAPPC5Q8IUR0 188 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 PSTKQ8IV42 348 aaKnown RBP13.41□□□□□ -0.26
PRPF39-204ENST00000553605 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 NR4A3Q92570 626 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 EID2BQ96D98 161 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 MTFMTQ96DP5 389 aaKnown RBP13.41□□□□□ -0.26
PRPF39-204ENST00000553605 MAGEB10Q96LZ2 347 aaPredicted RBP13.41□□□□□ -0.26
PRPF39-204ENST00000553605 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
PRPF39-204ENST00000553605 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 ANKRD66B4E2M5 251 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 H3BRJ5 948 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 MAP3K7O43318 606 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 CBSLP0DN79 551 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 AGAP20933 346 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 MIPP30301 263 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 CBSP35520 551 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 Q0VFX4 171 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 GALNT3Q14435 633 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 QPCTQ16769 361 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 CYP4V2Q6ZWL3 525 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-204ENST00000553605 AMZ2Q86W34 360 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 OR1N1Q8NGS0 311 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 TEKT4Q8WW24 435 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 SPOCK3Q9BQ16 436 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 ZFYVE1Q9HBF4 777 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 SLC6A20Q9NP91 592 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 IMP3Q9NV31 184 aaKnown RBP13.4□□□□□ -0.26
PRPF39-204ENST00000553605 SEPT11Q9NVA2 429 aaKnown RBP13.4□□□□□ -0.26
PRPF39-204ENST00000553605 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-204ENST00000553605 NDOR1Q9UHB4 597 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 SH3BGRL2Q9UJC5 107 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 CFAP20Q9Y6A4 193 aaKnown RBP13.4□□□□□ -0.26
PRPF39-204ENST00000553605 CCDC88CQ9P219 2028 aa13.4□□□□□ -0.26
PRPF39-204ENST00000553605 RNF8O76064 485 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 UNC5CO95185 931 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 UMODP07911 640 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 MTHFD1P11586 935 aaKnown RBP13.39□□□□□ -0.27
PRPF39-204ENST00000553605 POLR2CP19387 275 aaPredicted RBP13.39□□□□□ -0.27
PRPF39-204ENST00000553605 ARL4AP40617 200 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 SMSP52788 366 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 FOXL2P58012 376 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 DCDC1P59894 354 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 DMPKQ09013 629 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 TMEM115Q12893 351 aaPredicted RBP13.39□□□□□ -0.27
PRPF39-204ENST00000553605 PRKAA1Q13131 559 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 XRCC4Q13426 336 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.39□□□□□ -0.27
PRPF39-204ENST00000553605 C1orf189Q5VU69 101 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 ALG1LQ6GMV1 187 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 ZFPM2Q8WW38 1151 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 TAAR6Q96RI8 345 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
PRPF39-204ENST00000553605 RAD18Q9NS91 495 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 FBXL4Q9UKA2 621 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 POMT2Q9UKY4 750 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 CNTRLQ7Z7A1 2325 aa13.39□□□□□ -0.27
PRPF39-204ENST00000553605 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 FAM221AA4D161 298 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 CNOT3O75175 753 aaKnown RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 ALOX12BO75342 701 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 POP7O75817 140 aaKnown RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 LMAN1P49257 510 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 JAM2P57087 298 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 DCDP81605 110 aaKnown RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 ADORA2A-AS1P86434 159 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 SYCP1Q15431 976 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 FAM83HQ6ZRV2 1179 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 LINC00696Q6ZRV3 163 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 POLNQ7Z5Q5 900 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 TMEM151BQ8IW70 566 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 GPR135Q8IZ08 494 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 MCOLN2Q8IZK6 566 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 ARRDC2Q8TBH0 407 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 NACC2Q96BF6 587 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 ZNF653Q96CK0 615 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 TTC25Q96NG3 672 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 LHPPQ9H008 270 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 GANQ9H2C0 597 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 RBM22Q9NW64 420 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 NFKBIL1Q9UBC1 381 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-204ENST00000553605 SLC24A2Q9UI40 661 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 CDYLQ9Y232 598 aa13.38□□□□□ -0.27
PRPF39-204ENST00000553605 DOCK10Q96BY6 2186 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms