RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 SLC26A11Q86WA9 606 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 OR4D9Q8NGE8 314 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC37A2Q8TED4 501 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 SEC14L1Q92503 715 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ELMO1Q92556 727 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 KCNJ9Q92806 393 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ART4Q93070 314 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 NXPE2Q96DL1 559 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 VPS39Q96JC1 886 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CD180Q99467 661 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 CMKLR1Q99788 373 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 TRIM51Q9BSJ1 452 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 RAB33BQ9H082 229 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 FAM96AQ9H5X1 160 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 COG4Q9H9E3 785 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC40A1Q9NP59 571 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ARFGAP3Q9NP61 516 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 PRDM8Q9NQV8 689 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 LATS2Q9NRM7 1088 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 TOR4AQ9NXH8 423 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 ZFATQ9P243 1243 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC2A6Q9UGQ3 507 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 TEX264Q9Y6I9 313 aa10.06□□□□□ -0.8
TRAFD1-208ENST00000552890 LY6G6EA0A0G2JKS1 128 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 ZCWPW2A0A1B0GU75 182 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 NTN3O00634 580 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 VPS26AO75436 327 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 FKBP9O95302 570 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 RPLP0P05388 317 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 TUBBP07437 444 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CELA2BP08218 269 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 MTHFD1P11586 935 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 PKMP14618 531 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CHRM3P20309 590 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 STX2P32856 288 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 HSD17B2P37059 387 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 ELK3P41970 407 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 LEPRP48357 1165 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CTSCP53634 463 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 TERF1P54274 439 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 PLTPP55058 493 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 INHBCP55103 352 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 UBE2IP63279 158 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 B4GALNT1Q00973 533 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 INSM1Q01101 510 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 MGAT5Q09328 741 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 PLCL1Q15111 1095 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 MAP9Q49MG5 647 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 KHDC1Q4VXA5 237 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 FAM182AQ5T1J6 154 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 HES3Q5TGS1 186 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CDCP2Q5VXM1 449 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 STEAP4Q687X5 459 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 TMEM71Q6P5X7 295 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CCNI2Q6ZMN8 369 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 KDM7AQ6ZMT4 941 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 NEK10Q6ZWH5 1172 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 PDZD3Q86UT5 571 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CNTN4Q8IWV2 1026 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 TBC1D21Q8IYX1 336 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 ZBED8Q8IZ13 594 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 ACVR1CQ8NER5 493 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CCL4L1Q8NHW4 92 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 WDR36Q8NI36 951 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 TFGQ92734 400 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC22A18Q96BI1 424 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC97Q96F63 343 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 CERS2Q96G23 380 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 LIN37Q96GY3 246 aaPredicted RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 C12orf66Q96MD2 445 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 ZNF778Q96MU6 729 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 TRIT1Q9H3H1 467 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 KIR3DX1Q9H7L2 352 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 TAS2R13Q9NYV9 303 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 EPHA6Q9UF33 1036 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 SLC23A2Q9UGH3 650 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 FBXO5Q9UKT4 447 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 PRKAB1Q9Y478 270 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 ENTPD2Q9Y5L3 495 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 RNF215Q9Y6U7 377 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 U3KQA8 63 aa10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 ZFC3H1O60293 1989 aaKnown RBP10.05□□□□□ -0.8
TRAFD1-208ENST00000552890 IGHV1OR21-1A0A087WYE8 117 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 CCDC187A0A096LP49 1063 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 D6RAR5 112 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 CCL22O00626 93 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 FANCGO15287 622 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 UBXN7O94888 489 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 SLCO2B1O94956 709 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 RPL10P27635 214 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 AOAHP28039 575 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 RBMS1P29558 406 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 PBLDP30039 288 aaPredicted RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 CSTF2P33240 577 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 EIF3BP55884 814 aaKnown RBP10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 GUCY2DQ02846 1103 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 NFE2L1Q14494 772 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 RPE65Q16518 533 aa10.04□□□□□ -0.8
TRAFD1-208ENST00000552890 PLA2G4EQ3MJ16 856 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms