RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 PQLC3Q8N755 202 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 CEP112Q8N8E3 955 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 CT55Q8WUE5 264 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 TFB1MQ8WVM0 346 aaKnown RBP8.52□□□□□ -1.05
TMEM116-217ENST00000552801 THAP4Q8WY91 577 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 RAPGEF5Q92565 580 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 RSC1A1Q92681 617 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 MR1Q95460 341 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 LRRC45Q96CN5 670 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 FAF2Q96CS3 445 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 VPS35Q96QK1 796 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 CD180Q99467 661 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 DESI2Q9BSY9 194 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SLC25A23Q9BV35 468 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 FSD1LQ9BXM9 530 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 GPR87Q9BY21 358 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SPRY4Q9C004 299 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 ACTL8Q9H568 366 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 GLOD4Q9HC38 313 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SLC40A1Q9NP59 571 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 LHX9Q9NQ69 397 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 WASH6PQ9NQA3 447 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 IMP3Q9NV31 184 aaKnown RBP8.52□□□□□ -1.05
TMEM116-217ENST00000552801 DDX56Q9NY93 547 aaKnown RBP8.52□□□□□ -1.05
TMEM116-217ENST00000552801 UBP1Q9NZI7 540 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 HACD3Q9P035 362 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SCHIP1Q9P0W5 487 aaPredicted RBP8.52□□□□□ -1.05
TMEM116-217ENST00000552801 SLC23A2Q9UGH3 650 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 TLK1Q9UKI8 766 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 PSMD13Q9UNM6 376 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 DOPEY2Q9Y3R5 2298 aa8.52□□□□□ -1.05
TMEM116-217ENST00000552801 BLACEA4D250 179 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 ZNF487B1APH4 448 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 MAP2K7O14733 419 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 KIF1CO43896 1103 aaKnown RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 CPNE3O75131 537 aaKnown RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SCRG1O75711 98 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 POP7O75817 140 aaKnown RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 MT-CYBP00156 380 aaPredicted RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 MMP2P08253 660 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SLC35G4P0C7Q5 338 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 TMEM253P0C7T8 217 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 RALBP11234 206 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 NR1D1P20393 614 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 NR2C2P49116 596 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 WDR4P57081 412 aaKnown RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 HSD11B2P80365 405 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SLC10A2Q12908 348 aaPredicted RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SLC14A2Q15849 920 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SLC18A3Q16572 532 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 ATP13A5Q4VNC0 1218 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 TEX44Q53QW1 395 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 KAZNQ674X7 775 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 TMEM220Q6QAJ8 160 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 FAM151BQ6UXP7 276 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SYVN1Q86TM6 617 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 KMT5CQ86Y97 462 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 CCDC50Q8IVM0 306 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 RHOT2Q8IXI1 618 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SPATA22Q8NHS9 363 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 BLOC1S5Q8TDH9 187 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 N4BP2L2Q92802 583 aaPredicted RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 DCUN1D1Q96GG9 259 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 ZNF514Q96K75 400 aaPredicted RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 CCDC42Q96M95 316 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 FCRL4Q96PJ5 515 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 SLC29A3Q9BZD2 475 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 HRASLS2Q9NWW9 162 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 NFKBIL1Q9UBC1 381 aaPredicted RBP8.51□□□□□ -1.05
TMEM116-217ENST00000552801 FAM8A1Q9UBU6 413 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 EPHA6Q9UF33 1036 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 FAM153AQ9UHL3 310 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 COLEC10Q9Y6Z7 277 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 BOD1L1Q8NFC6 3051 aa8.51□□□□□ -1.05
TMEM116-217ENST00000552801 GLYATL1P3A0A0U1RQE8 302 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 TLCD2A6NGC4 264 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 ARGFXA6NJG6 315 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 OR2AG2A6NM03 316 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 STX7O15400 261 aaKnown RBP8.5□□□□□ -1.05
TMEM116-217ENST00000552801 SASH3O75995 380 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 RECKO95980 971 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 EBLN1P0CF75 366 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 CDH3P22223 829 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 F8A1P23610 371 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 PTPN4P29074 926 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 HMGCLP35914 325 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 SLC1A1P43005 524 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 CCL11P51671 97 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 IHHQ14623 411 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 FNBP1LQ5T0N5 605 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 PID1Q7Z2X4 250 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 VSIG1Q86XK7 387 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 PLD5Q8N7P1 536 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 CNTD1Q8N815 330 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 IPMKQ8NFU5 416 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 OR8K5Q8NH50 307 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 SLC35G2Q8TBE7 412 aa8.5□□□□□ -1.05
TMEM116-217ENST00000552801 CPT1CQ8TCG5 803 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms