RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 PLCL1Q15111 1095 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 FAM209AQ5JX71 171 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 C10orf120Q5SQS8 335 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 C6orf141Q5SZD1 244 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 RAP1GAP2Q684P5 730 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 SIGIRRQ6IA17 410 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 USP43Q70EL4 1123 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TUBA1AQ71U36 451 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TAS1R1Q7RTX1 841 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TMEM173Q86WV6 379 aaPredicted RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 SLC22A9Q8IVM8 553 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TMEM199Q8N511 208 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 OR13J1Q8NGT2 312 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 POP5Q969H6 163 aaKnown RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 IMP4Q96G21 291 aaKnown RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 PAWRQ96IZ0 340 aaKnown RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TTPALQ9BTX7 342 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TMEM106CQ9BVX2 250 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 FSD1LQ9BXM9 530 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ASPSCR1Q9BZE9 553 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ADNPQ9H2P0 1102 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ATXN3LQ9H3M9 355 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ARNT2Q9HBZ2 717 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ATP13A1Q9HD20 1204 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TREX1Q9NSU2 369 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TMEM45AQ9NWC5 275 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 COMMD8Q9NX08 183 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 XPR1Q9UBH6 696 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 SLC2A6Q9UGQ3 507 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 NT5C1B-RDH14C9J2C7 533 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 GUCY1B2O75343 617 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 PRSS23O95084 383 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 MATN4O95460 622 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 NPPAP01160 153 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 MMP2P08253 660 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ZDHHC11BP0C7U3 371 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 SLC35E2BP0CK96 405 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 HTR1BP28222 390 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 HOXD11P31277 338 aaPredicted RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 CA8P35219 290 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 BMPR1AP36894 532 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ARSFP54793 590 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 SLC10A7Q0GE19 358 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 C19orf57Q0VDD7 668 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 GRIK2Q13002 908 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 DUSP4Q13115 394 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 IHHQ14623 411 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 PAGE2BQ5JRK9 111 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 LDLRAP1Q5SW96 308 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 PRR23BQ6ZRT6 265 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 KDELC2Q7Z4H8 507 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 BTLAQ7Z6A9 289 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 DENND6AQ8IWF6 608 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TEX26Q8N6G2 289 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ASCC1Q8N9N2 400 aaKnown RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 SUN5Q8TC36 379 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 BCL7CQ8WUZ0 217 aaPredicted RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TTC9Q92623 222 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 PSMG2Q969U7 264 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 ZNF566Q969W8 418 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 NODALQ96S42 347 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 SEPT5Q99719 369 aaPredicted RBP10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 NT5MQ9NPB1 228 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 PCDHGA11Q9Y5H2 935 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 DGKBQ9Y6T7 804 aa10.88□□□□□ -0.67
TUBA1C-209ENST00000552448 TCRBV5S2A0A599 114 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 SLC12A8A0AV02 714 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 FAM25AB3EWG3 89 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 FAM25CB3EWG5 89 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 FAM25GB3EWG6 89 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 H0Y626 953 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 INPP4BO15327 924 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 VPS4BO75351 444 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 TRIM16O95361 564 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 SEC24AO95486 1093 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 HMBSP08397 361 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 RBP1P09455 135 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 STMN1P16949 149 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 GPX3P22352 226 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 ELK4P28324 431 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 EIF2DP41214 584 aaKnown RBP10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 CASP3P42574 277 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 YAP1P46937 504 aaKnown RBP10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 MRPL19P49406 292 aaKnown RBP10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 MAPK10P53779 464 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 TPD52P55327 224 aaPredicted RBP10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 DEFA1P59665 94 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 DEFA3P59666 94 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 MVKQ03426 396 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 CTBP1Q13363 440 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 LRRC26Q2I0M4 334 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 MARC1Q5VT66 337 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 KIAA0930Q6ICG6 404 aaPredicted RBP10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 ZNF544Q6NX49 715 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 ERAP2Q6P179 960 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 TMC5Q6UXY8 1006 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.87□□□□□ -0.674e-8■■■□□ 18.6
TUBA1C-209ENST00000552448 LARP4Q71RC2 724 aaKnown RBP eCLIP10.87□□□□□ -0.678e-8■■■■■ 27.1
TUBA1C-209ENST00000552448 DSG4Q86SJ6 1040 aa10.87□□□□□ -0.67
TUBA1C-209ENST00000552448 MIER2Q8N344 545 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms