RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 ZNF225Q9UK10 706 aa12.07□□□□□ -0.48
ERBB3-219ENST00000551242 SNX6Q9UNH7 406 aa12.07□□□□□ -0.48
ERBB3-219ENST00000551242 PCM1Q15154 2024 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 DNAH12Q6ZR08 3092 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 FAM234BA2RU67 622 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 METTL15A6NJ78 407 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 KMOO15229 486 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ALX3O95076 343 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 PRR35P0CG20 571 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 HOXD8P13378 290 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ENDOUP21128 410 aaKnown RBP12.06□□□□□ -0.48
ERBB3-219ENST00000551242 LIPAP38571 399 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 GEMP55040 296 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 WNT3AP56704 352 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 CHRNEQ04844 493 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 PRKG2Q13237 762 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 PTPRCAPQ14761 206 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 FAM214AQ32MH5 1076 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 FBXO47Q5MNV8 452 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ZCCHC8Q6NZY4 707 aaKnown RBP12.06□□□□□ -0.48
ERBB3-219ENST00000551242 CATSPERGQ6ZRH7 1159 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 CLEC20AQ6ZU45 233 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 PAQR9Q6ZVX9 377 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 SYVN1Q86TM6 617 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 CYP4Z1Q86W10 505 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 OSTM1Q86WC4 334 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 EID3Q8N140 333 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 SVOPLQ8N434 492 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 RNF34Q969K3 372 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 RHBDF1Q96CC6 855 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ZFYVE19Q96K21 471 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ASB2Q96Q27 587 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 MED10Q9BTT4 135 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 THUMPD3Q9BV44 507 aaKnown RBP12.06□□□□□ -0.48
ERBB3-219ENST00000551242 MMP27Q9H306 513 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 TRIM39Q9HCM9 518 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 NDFIP2Q9NV92 336 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 FBXL12Q9NXK8 326 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 KLK14Q9P0G3 267 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 VAPAQ9P0L0 249 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 TPRKBQ9Y3C4 175 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 SLC16A6O15403 523 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 RGS10O43665 173 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 HBP1O60381 514 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 AKAP5P24588 427 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 EPHA2P29317 976 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 FMO4P31512 558 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 TIAL1Q01085 375 aaKnown RBP eCLIP12.06□□□□□ -0.48
ERBB3-219ENST00000551242 GALK2Q01415 458 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ZFP69Q49AA0 526 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 PRSS36Q5K4E3 855 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 C6orf136Q5SQH8 315 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 SIGIRRQ6IA17 410 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 LYPD8Q6UX82 237 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 AHSA2Q719I0 299 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ZFAND4Q86XD8 727 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 GALNT12Q8IXK2 581 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 KLHDC8BQ8IXV7 354 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ZNF566Q969W8 418 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 FAM162AQ96A26 154 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 EMID1Q96A84 441 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-219ENST00000551242 TSGA13Q96PP4 275 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 TMEM209Q96SK2 561 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 CYP2S1Q96SQ9 504 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 NFKBIZQ9BYH8 718 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 PRKD2Q9BZL6 878 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 BRINP2Q9C0B6 783 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 TRMT13Q9NUP7 481 aaKnown RBP12.06□□□□□ -0.48
ERBB3-219ENST00000551242 VNN3Q9NY84 501 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 IKZF3Q9UKT9 509 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 ORC6Q9Y5N6 252 aa12.06□□□□□ -0.48
ERBB3-219ENST00000551242 HAT1O14929 419 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 MAFKO60675 156 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 FAM20BO75063 409 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 PGK2P07205 417 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 HTR3AP46098 478 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 NRG1Q02297 640 aaPredicted RBP12.05□□□□□ -0.48
ERBB3-219ENST00000551242 CEP78Q5JTW2 689 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 HOMEZQ8IX15 550 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 DEPDC4Q8N2C3 294 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 KIAA1958Q8N8K9 716 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 APPL2Q8NEU8 664 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 SUN5Q8TC36 379 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 FBLIM1Q8WUP2 373 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 NCLNQ969V3 563 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 CDK15Q96Q40 435 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 ATOH8Q96SQ7 321 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 PAQR5Q9NXK6 330 aaPredicted RBP12.05□□□□□ -0.48
ERBB3-219ENST00000551242 SCN3BQ9NY72 215 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 PKP3Q9Y446 797 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 NEUROG3Q9Y4Z2 214 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
ERBB3-219ENST00000551242 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
ERBB3-219ENST00000551242 AGRPO00253 132 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 ZW10O43264 779 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 AIREO43918 545 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 ICMTO60725 284 aa12.05□□□□□ -0.48
ERBB3-219ENST00000551242 VPS4BO75351 444 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms