RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 ZNF696Q9H7X3 374 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 HACD3Q9P035 362 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 ACTR3BQ9P1U1 418 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 PTPRSQ13332 1948 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 KRT87PA6NCN2 255 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 STAMBPO95630 424 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 TRBC1P01850 177 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 CD9P21926 228 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 GABRR2P28476 465 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 PPM1AP35813 382 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 EPHB3P54753 998 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 CDH15P55291 814 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 LMAN2Q12907 356 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 AP5B1Q2VPB7 878 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 PPP4R4Q6NUP7 873 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 CARM1Q86X55 608 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 ANKFN1Q8N957 763 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 GPR26Q8NDV2 337 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 TMIGD2Q96BF3 282 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 MTFMTQ96DP5 389 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 SEPHS2Q99611 448 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 KCTD14Q9BQ13 255 aaPredicted RBP13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 RPF2Q9H7B2 306 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 CAAP1Q9H8G2 361 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 CFAP97Q9P2B7 532 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 ZNHIT2Q9UHR6 403 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 OAZ3Q9UMX2 235 aa13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 RANBP2P49792 3224 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-218ENST00000550804 CARNS1A5YM72 827 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 CCDC160A6NGH7 325 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 H3BSA7 217 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 LSM1O15116 133 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 EEDO75530 441 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 CKMP06732 381 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 ZNF7P17097 686 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 HSPA13P48723 471 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 OR4D2P58180 307 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 MTPNP58546 118 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 HTRA4P83105 476 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 HMGCS1Q01581 520 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 ROR2Q01974 943 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 PTGR1Q14914 329 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 NR6A1Q15406 480 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 PABPC1LQ4VXU2 614 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 SLC44A4Q53GD3 710 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 PYCR3Q53H96 274 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 LCN8Q6JVE9 175 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 MILR1Q7Z6M3 343 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 DCAF4L2Q8NA75 395 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 PDLIM5Q96HC4 596 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 ZBP1Q9H171 429 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 AGPAT4Q9NRZ5 378 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 A0A1B0GVG6 124 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 NPIPB15A6NHN6 443 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 AQP12BA6NM10 295 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 TXNL4AP83876 142 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 TRAF3Q13114 568 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 PRMT9Q6P2P2 845 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 CYP20A1Q6UW02 462 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 DLEU7Q6UYE1 221 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 ZNF783Q6ZMS7 281 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 AQP12AQ8IXF9 295 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 GPR65Q8IYL9 337 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 CMTM8Q8IZV2 173 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 STK40Q8N2I9 435 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 FAM47BQ8NA70 645 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 NCSTNQ92542 709 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 DGCR14Q96DF8 476 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 EGFL8Q99944 293 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 OSBPL11Q9BXB4 747 aa13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 SOX17Q9H6I2 414 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 CXXC1Q9P0U4 656 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 PTBP2Q9UKA9 531 aaKnown RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 POLR3HQ9Y535 204 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO1-218ENST00000550804 TGM5O43548 720 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 FGBP02675 491 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 CTSAP10619 480 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 SLC2A4P14672 509 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 IL10P22301 178 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 HRH2P25021 359 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 PSMA4P25789 261 aaKnown RBP13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 PPP3CCP48454 512 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 RETSATQ6NUM9 610 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 SNX20Q7Z614 316 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 FIBCD1Q8N539 461 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 TFAP2CQ92754 450 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 C2orf49Q9BVC5 232 aaPredicted RBP13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 TRIM54Q9BYV2 358 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 RIC8BQ9NVN3 520 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 SMOXQ9NWM0 555 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 NUDT4Q9NZJ9 180 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 SUN2Q9UH99 717 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 CCL27Q9Y4X3 112 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 XIRP2A4UGR9 3374 aa13.93□□□□□ -0.18
CALCOCO1-218ENST00000550804 GLYATL1P3A0A0U1RQE8 302 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms