RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ZBED8Q8IZ13 594 aa22.06■■□□□ 1.12
BRF1-216ENST00000550208 BIRC8Q96P09 236 aa22.06■■□□□ 1.12
BRF1-216ENST00000550208 SLC38A3Q99624 504 aa22.06■■□□□ 1.12
BRF1-216ENST00000550208 SYNDIG1Q9H7V2 258 aa22.06■■□□□ 1.12
BRF1-216ENST00000550208 SAYSD1Q9NPB0 183 aa22.06■■□□□ 1.12
BRF1-216ENST00000550208 FBXO6Q9NRD1 293 aaPredicted RBP22.06■■□□□ 1.12
BRF1-216ENST00000550208 FBXO5Q9UKT4 447 aa22.06■■□□□ 1.12
BRF1-216ENST00000550208 CFAP20Q9Y6A4 193 aaKnown RBP22.06■■□□□ 1.12
BRF1-216ENST00000550208 PTPRBP23467 1997 aa22.06■■□□□ 1.12
BRF1-216ENST00000550208 F8W8V4 182 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 NTN3O00634 580 aaPredicted RBP22.05■■□□□ 1.12
BRF1-216ENST00000550208 PFDN6O15212 129 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 JUPP14923 745 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 CCR7P32248 378 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 SLC1A2P43004 574 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 GPR3P46089 330 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 PREPP48147 710 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 AMZ1Q400G9 498 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 CTSL3PQ5NE16 218 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 RNF187Q5TA31 235 aaPredicted RBP22.05■■□□□ 1.12
BRF1-216ENST00000550208 TRMT10BQ6PF06 316 aaKnown RBP22.05■■□□□ 1.12
BRF1-216ENST00000550208 LRRC6Q86X45 466 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 TRIM48Q8IWZ4 208 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 LMNTD2Q8IXW0 634 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 GALNT15Q8N3T1 639 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 CALML6Q8TD86 181 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 SH3KBP1Q96B97 665 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 CXorf40BQ96DE9 158 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 RMDN2Q96LZ7 410 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 OR52A5Q9H2C5 316 aa22.05■■□□□ 1.12
BRF1-216ENST00000550208 ATXN7L1Q9ULK2 861 aaPredicted RBP22.05■■□□□ 1.12
BRF1-216ENST00000550208 SLC5A10A0PJK1 596 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 EIF3HO15372 352 aaKnown RBP eCLIP22.04■■□□□ 1.12
BRF1-216ENST00000550208 SLC35G4P0C7Q5 338 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 CD1CP29017 333 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 CARSP49589 748 aaKnown RBP22.04■■□□□ 1.12
BRF1-216ENST00000550208 MPP1Q00013 466 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 TARDBPQ13148 414 aaKnown RBP eCLIP22.04■■□□□ 1.12
BRF1-216ENST00000550208 NKAIN2Q5VXU1 208 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 USP53Q70EK8 1073 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 LRRN4CLQ8ND94 238 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 PYROXD1Q8WU10 500 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 CERS2Q96G23 380 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 C12orf66Q96MD2 445 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 GFM1Q96RP9 751 aaKnown RBP22.04■■□□□ 1.12
BRF1-216ENST00000550208 FAM167BQ9BTA0 163 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 STN1Q9H668 368 aaKnown RBP22.04■■□□□ 1.12
BRF1-216ENST00000550208 INTS10Q9NVR2 710 aaKnown RBP22.04■■□□□ 1.12
BRF1-216ENST00000550208 KCNK4Q9NYG8 393 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 GNPTGQ9UJJ9 305 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 CLCA2Q9UQC9 943 aa22.04■■□□□ 1.12
BRF1-216ENST00000550208 UNC13CQ8NB66 2214 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 FAM221BA6H8Z2 402 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 ESPNB1AK53 854 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 LIN7AO14910 233 aaPredicted RBP22.03■■□□□ 1.12
BRF1-216ENST00000550208 HAUS5O94927 633 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 CSE1LP55060 971 aaKnown RBP22.03■■□□□ 1.12
BRF1-216ENST00000550208 RPA4Q13156 261 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 BOP1Q14137 746 aaKnown RBP22.03■■□□□ 1.12
BRF1-216ENST00000550208 DNTTIP2Q5QJE6 756 aaKnown RBP22.03■■□□□ 1.12
BRF1-216ENST00000550208 DUS1LQ6P1R4 473 aaKnown RBP22.03■■□□□ 1.12
BRF1-216ENST00000550208 ZNF449Q6P9G9 518 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 TMEM26Q6ZUK4 368 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 AVL9Q8NBF6 648 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 WDR48Q8TAF3 677 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 TBC1D10AQ9BXI6 508 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 L2HGDHQ9H9P8 463 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 SLC40A1Q9NP59 571 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 PPANQ9NQ55 473 aaKnown RBP22.03■■□□□ 1.12
BRF1-216ENST00000550208 FAM114A2Q9NRY5 505 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 ZDHHC18Q9NUE0 388 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 IMP3Q9NV31 184 aaKnown RBP22.03■■□□□ 1.12
BRF1-216ENST00000550208 PCDHB1Q9Y5F3 818 aa22.03■■□□□ 1.12
BRF1-216ENST00000550208 KNTC1P50748 2209 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 IGHV1OR21-1A0A087WYE8 117 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 ESR1P03372 595 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 MTHFD1P11586 935 aaKnown RBP22.02■■□□□ 1.12
BRF1-216ENST00000550208 PKMP14618 531 aaKnown RBP22.02■■□□□ 1.12
BRF1-216ENST00000550208 AOAHP28039 575 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 ADARP55265 1226 aaKnown RBP22.02■■□□□ 1.12
BRF1-216ENST00000550208 SPIDRQ14159 915 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 TEDDM1Q5T9Z0 273 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 ZNF549Q6P9A3 640 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 CNSTQ6PJW8 725 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 CCNI2Q6ZMN8 369 aaPredicted RBP22.02■■□□□ 1.12
BRF1-216ENST00000550208 CCDC25Q86WR0 208 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 PALM2Q8IXS6 379 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 CACTIN-AS1Q8N1I8 211 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 DCBLD1Q8N8Z6 715 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 C2CD4AQ8NCU7 369 aaPredicted RBP22.02■■□□□ 1.12
BRF1-216ENST00000550208 IFT81Q8WYA0 676 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 TSSK1BQ9BXA7 367 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.02■■□□□ 1.12
BRF1-216ENST00000550208 POT1Q9NUX5 634 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 VPS9D1Q9Y2B5 631 aa22.02■■□□□ 1.12
BRF1-216ENST00000550208 ZW10O43264 779 aa22.01■■□□□ 1.11
BRF1-216ENST00000550208 NIPSNAP2O75323 286 aa22.01■■□□□ 1.11
BRF1-216ENST00000550208 GPC4O75487 556 aa22.01■■□□□ 1.11
BRF1-216ENST00000550208 GABRB3P28472 473 aa22.01■■□□□ 1.11
BRF1-216ENST00000550208 SHC2P98077 582 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms