RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CRADDP78560 199 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 KCNJ11Q14654 390 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 AARS2Q5JTZ9 985 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 PCID2Q5JVF3 399 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 DUS1LQ6P1R4 473 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 ZNF449Q6P9G9 518 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 KLHL35Q6PF15 583 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 CCDC137Q6PK04 289 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 XKR5Q6UX68 686 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 CERS6Q6ZMG9 384 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 PDZD3Q86UT5 571 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 CFAP206Q8IYR0 622 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 OR4L1Q8NH43 312 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 USP7Q93009 1102 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 TGM7Q96PF1 710 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 FOXJ2Q9P0K8 574 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 HEBP2Q9Y5Z4 205 aa16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 CFAP20Q9Y6A4 193 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-208ENST00000550102 EFCAB7A8K855 629 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 B4E171 279 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 C9orf172C9J069 976 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 F8W8V4 182 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 C9P02748 559 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 POLBP06746 335 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 FGF3P11487 239 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 TCP1P17987 556 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 CD82P27701 267 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 TSPAN7P41732 249 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 NPY2RP49146 381 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 TMPRSS3P57727 454 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 RAB15P59190 212 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 SARNPP82979 210 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 RPA4Q13156 261 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 CLN3Q13286 438 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 GSE1Q14687 1217 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 ZNF658BQ4V348 819 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 FASTKD1Q53R41 847 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 LRRC8BQ6P9F7 803 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 ZNF534Q76KX8 674 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 ARHGAP22Q7Z5H3 698 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 LILRA3Q8N6C8 439 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 GRK7Q8WTQ7 553 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 ART4Q93070 314 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 CRELD1Q96HD1 420 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 SGSM3Q96HU1 749 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 TAAR9Q96RI9 348 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 INSM2Q96T92 566 aaPredicted RBP16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 DDA1Q9BW61 102 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 KIR3DX1Q9H7L2 352 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 CHRAC1Q9NRG0 131 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 CATSPERZQ9NTU4 200 aa16.84■□□□□ 0.29
CHMP1A-208ENST00000550102 ZNF185O15231 689 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 TOX3O15405 576 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 CAPN5O15484 640 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 LIPCP11150 499 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 MGAT1P26572 445 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 NDUFS1P28331 727 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 PPARGP37231 505 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 KCTD19Q17RG1 926 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 ARMC3Q5W041 872 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 CAPRIN2Q6IMN6 1127 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 MGAQ8IWI9 3026 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 BMPERQ8N8U9 685 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 ZFPM2Q8WW38 1151 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 ZDHHC12Q96GR4 267 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 C9orf72Q96LT7 481 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 FCRL3Q96P31 734 aaPredicted RBP16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 MRM3Q9HC36 420 aaKnown RBP16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 TREX1Q9NSU2 369 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 SYBUQ9NX95 663 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 SLC39A1Q9NY26 324 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 PYCARDQ9ULZ3 195 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 PCDHGA3Q9Y5H0 932 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 COLEC10Q9Y6Z7 277 aa16.83■□□□□ 0.28
CHMP1A-208ENST00000550102 TCRBV7S3A2A0A539 114 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 IFRD1O00458 451 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 LIN7AO14910 233 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 RASSF9O75901 435 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 OR56A5P0C7T3 313 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 LEPRP48357 1165 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 TERF1P54274 439 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 GNG11P61952 73 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 KRT33BQ14525 404 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 SYTL3Q4VX76 610 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 IRGCQ6NXR0 463 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 PRSS42Q7Z5A4 293 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 MPP5Q8N3R9 675 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 JPH3Q8WXH2 748 aaPredicted RBP16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 KIFC1Q9BW19 673 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 ASPSCR1Q9BZE9 553 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 RAB33BQ9H082 229 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 OR52A5Q9H2C5 316 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 XAB2Q9HCS7 855 aaKnown RBP16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 OCIAD1Q9NX40 245 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 EPHA6Q9UF33 1036 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 SLC24A2Q9UI40 661 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 ANAPC5Q9UJX4 755 aa16.82■□□□□ 0.28
CHMP1A-208ENST00000550102 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms