RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 HSPA14Q0VDF9 509 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 STPG1Q5TH74 334 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 FAM45BPQ6NSW5 357 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 EID2Q8N6I1 236 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 GIMAP7Q8NHV1 300 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 FAM45AQ8TCE6 357 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 NLGN3Q9NZ94 848 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SIRPGQ9P1W8 387 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 VWA7Q9Y334 891 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 IKBKGQ9Y6K9 419 aa20.78■□□□□ 0.92
VPS29-206ENST00000549578 SLC5A10A0PJK1 596 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 A6NCN8 305 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 LIN7AO14910 233 aaPredicted RBP20.77■□□□□ 0.92
VPS29-206ENST00000549578 ITGA2BP08514 1039 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 CD59P13987 128 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 PDHA2P29803 388 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 TAS2R39P59534 338 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 BMPR2Q13873 1038 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 SUZ12Q15022 739 aaKnown RBP20.77■□□□□ 0.92
VPS29-206ENST00000549578 LVRNQ6Q4G3 990 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 ZBTB2Q8N680 514 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 OR4C6Q8NH72 309 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 OR2W6PQ8NHA6 318 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 CD200R1Q8TD46 325 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 ZDHHC1Q8WTX9 485 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 DCAKDQ8WVC6 231 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 PATE1Q8WXA2 126 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 GPR22Q99680 433 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 DHRS4Q9BTZ2 278 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 TAS2R13Q9NYV9 303 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 SLC39A10Q9ULF5 831 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 CDYLQ9Y232 598 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 WDR37Q9Y2I8 494 aa20.77■□□□□ 0.92
VPS29-206ENST00000549578 TPP1O14773 563 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 APOA4P06727 396 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 BRAFP15056 766 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 FDXRP22570 491 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 SLC14A1Q13336 389 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 TMED2Q15363 201 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 DBX2Q6ZNG2 339 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 VRK3Q8IV63 474 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 SPDYE1Q8NFV5 336 aaPredicted RBP20.76■□□□□ 0.91
VPS29-206ENST00000549578 ASZ1Q8WWH4 475 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 TMEM159Q96B96 161 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 CCDC77Q9BR77 488 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 WWP1Q9H0M0 922 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 CAB39LQ9H9S4 337 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 LATS2Q9NRM7 1088 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 SCHIP1Q9P0W5 487 aaPredicted RBP20.76■□□□□ 0.91
VPS29-206ENST00000549578 TSR3Q9UJK0 312 aaKnown RBP20.76■□□□□ 0.91
VPS29-206ENST00000549578 ACSL5Q9ULC5 683 aa20.76■□□□□ 0.91
VPS29-206ENST00000549578 PTPRZ1P23471 2315 aaPredicted RBP20.76■□□□□ 0.91
VPS29-206ENST00000549578 TRBV23OR9-2A0A075B6M9 112 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 HMX2A2RU54 273 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 KPNA5O15131 536 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 SIGLEC6O43699 453 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 GPC4O75487 556 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 NUDT17P0C025 328 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 ALPPL2P10696 532 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 F3P13726 295 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 GRK6P43250 576 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 ZNF460Q14592 562 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 BEND6Q5SZJ8 279 aaPredicted RBP20.75■□□□□ 0.91
VPS29-206ENST00000549578 C6orf132Q5T0Z8 1188 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 MROH9Q5TGP6 573 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 NAGSQ8N159 534 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 SETD7Q8WTS6 366 aaKnown RBP20.75■□□□□ 0.91
VPS29-206ENST00000549578 OR52A5Q9H2C5 316 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 TRMT6Q9UJA5 497 aaKnown RBP20.75■□□□□ 0.91
VPS29-206ENST00000549578 PCOLCE2Q9UKZ9 415 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 DHRS7Q9Y394 339 aa20.75■□□□□ 0.91
VPS29-206ENST00000549578 FLRT2O43155 660 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 SLC35G4P0C7Q5 338 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 ILF2Q12905 390 aaKnown RBP20.74■□□□□ 0.91
VPS29-206ENST00000549578 RPA4Q13156 261 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 USP10Q14694 798 aaKnown RBP20.74■□□□□ 0.91
VPS29-206ENST00000549578 CLCA4Q14CN2 919 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 ACSBG2Q5FVE4 666 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 PLEKHS1Q5SXH7 462 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 AGAP9Q5VTM2 703 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 ABRAXAS1Q6UWZ7 409 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 CEP97Q8IW35 865 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 CPNE9Q8IYJ1 553 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 KYQ8NBH2 561 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 HNRNPLLQ8WVV9 542 aaKnown RBP20.74■□□□□ 0.91
VPS29-206ENST00000549578 INPP5DQ92835 1189 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 RMDN2Q96LZ7 410 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 DUSP23Q9BVJ7 150 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 FETUBQ9UGM5 382 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 ZNF180Q9UJW8 692 aa20.74■□□□□ 0.91
VPS29-206ENST00000549578 SMIM23A6NLE4 172 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 OR52A4PA6NMU1 304 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SH3BP5O60239 455 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 NOBOXO60393 691 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SLCO2B1O94956 709 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 MYF5P13349 255 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 CD9P21926 228 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SLCO1A2P46721 670 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SERPINB9P50453 376 aa20.73■□□□□ 0.91
VPS29-206ENST00000549578 SLC12A2P55011 1212 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms