RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 LRRC57Q8N9N7 239 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 SPC24Q8NBT2 197 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 SPATA22Q8NHS9 363 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 TFB1MQ8WVM0 346 aaKnown RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 CALR3Q96L12 384 aaKnown RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 TEKT5Q96M29 485 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 SRPK1Q96SB4 655 aaKnown RBP11.94□□□□□ -0.5
DDX54-206ENST00000549271 TIMM29Q9BSF4 260 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 HEMGNQ9BXL5 484 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 OR2AG1Q9H205 316 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 WASH6PQ9NQA3 447 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 IMPACTQ9P2X3 320 aa11.94□□□□□ -0.5
DDX54-206ENST00000549271 GRID2IPA4D2P6 1211 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 KMOO15229 486 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 VEGFDO43915 354 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 SLC25A14O95258 325 aaPredicted RBP11.93□□□□□ -0.5
DDX54-206ENST00000549271 MT-CYBP00156 380 aaPredicted RBP11.93□□□□□ -0.5
DDX54-206ENST00000549271 CTNNA2P26232 953 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 SLC19A1P41440 591 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 SEPHS1P49903 392 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 PER3P56645 1201 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 CDK18Q07002 472 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 GALNT3Q14435 633 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 AGAP9Q5VTM2 703 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 FAM199XQ6PEV8 388 aaPredicted RBP11.93□□□□□ -0.5
DDX54-206ENST00000549271 ABRAXAS1Q6UWZ7 409 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 RBM12BQ8IXT5 1001 aaKnown RBP11.93□□□□□ -0.5
DDX54-206ENST00000549271 GLIS1Q8NBF1 620 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 GPR26Q8NDV2 337 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 KLHL6Q8WZ60 621 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 ALG3Q92685 438 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 P3H4Q92791 437 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 GLYATL1Q969I3 302 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 HAUS1Q96CS2 278 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 RBM41Q96IZ5 413 aaKnown RBP11.93□□□□□ -0.5
DDX54-206ENST00000549271 SPATA16Q9BXB7 569 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 KLC4Q9NSK0 619 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 POT1Q9NUX5 634 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 SCHIP1Q9P0W5 487 aaPredicted RBP11.93□□□□□ -0.5
DDX54-206ENST00000549271 ZNF624Q9P2J8 865 aaPredicted RBP11.93□□□□□ -0.5
DDX54-206ENST00000549271 SLC23A2Q9UGH3 650 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDX54-206ENST00000549271 PIKFYVEQ9Y2I7 2098 aa11.93□□□□□ -0.5
DDX54-206ENST00000549271 SPG11Q96JI7 2443 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 ABCA2Q9BZC7 2435 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 PRSS44E7EML9 344 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 LRRTM2O43300 516 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 ZG16O60844 167 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 UBXN7O94888 489 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 IPO7O95373 1038 aaKnown RBP11.92□□□□□ -0.5
DDX54-206ENST00000549271 VIPP01282 170 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 ZNF7P17097 686 aaPredicted RBP11.92□□□□□ -0.5
DDX54-206ENST00000549271 PTPN7P35236 360 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 COPS2P61201 443 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 RPS15P62841 145 aaKnown RBP11.92□□□□□ -0.5
DDX54-206ENST00000549271 PWWP2BQ6NUJ5 590 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 AADACL2Q6P093 401 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 KDELC1Q6UW63 502 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 SPNS3Q6ZMD2 512 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 GDF7Q7Z4P5 450 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 PRSS42Q7Z5A4 293 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 LRRTM4Q86VH4 590 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 CCDC50Q8IVM0 306 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 ZNF567Q8N184 647 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 DTX3LQ8TDB6 740 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 TGM7Q96PF1 710 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 FCRL4Q96PJ5 515 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 VPS35Q96QK1 796 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 DESI2Q9BSY9 194 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 RAB33BQ9H082 229 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 C10orf88Q9H8K7 445 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 GPR83Q9NYM4 423 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 UBP1Q9NZI7 540 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 SEMA5BQ9P283 1151 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 C5AR2Q9P296 337 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 TRIM10Q9UDY6 481 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 EPHA6Q9UF33 1036 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 G3BP2Q9UN86 482 aaKnown RBP11.92□□□□□ -0.5
DDX54-206ENST00000549271 FARSAQ9Y285 508 aaKnown RBP11.92□□□□□ -0.5
DDX54-206ENST00000549271 B3GNT3Q9Y2A9 372 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 EFR3BQ9Y2G0 817 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 NTNG1Q9Y2I2 539 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 ZNF711Q9Y462 761 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 SLC30A1Q9Y6M5 507 aa11.92□□□□□ -0.5
DDX54-206ENST00000549271 FER1L5A0AVI2 2057 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 HACD1B0YJ81 288 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 APOC4-APOC2K7ER74 178 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 ZNF185O15231 689 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 KIF1CO43896 1103 aaKnown RBP11.91□□□□□ -0.5
DDX54-206ENST00000549271 KCNJ13O60928 360 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 PMPCBO75439 489 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 TMEM63AO94886 807 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 NDST3O95803 873 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 APOC2P02655 101 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 PIRTP0C851 137 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 PYGMP11217 842 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 BRAFP15056 766 aa11.91□□□□□ -0.5
DDX54-206ENST00000549271 BPIP17213 487 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms