RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 NSG1P42857 185 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 B4GALNT1Q00973 533 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 DUSP4Q13115 394 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 MESDQ14696 234 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SKIDA1Q1XH10 827 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ANKRD22Q5VYY1 191 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 METRNLQ641Q3 311 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CGB2Q6NT52 195 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SLC23A3Q6PIS1 610 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 THADAQ6YHU6 1953 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 TMEM64Q6YI46 380 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 C1orf122Q6ZSJ8 110 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 NLRC3Q7RTR2 1065 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PIP4P1Q86T03 277 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CDR2LQ86X02 465 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PDIK1LQ8N165 341 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 FBXL6Q8N531 539 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 OR2W6PQ8NHA6 318 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 WDR20Q8TBZ3 569 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 HM13Q8TCT9 377 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 C10orf82Q8WW14 230 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 RHBDF1Q96CC6 855 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 HSPBAP1Q96EW2 488 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PTCD3Q96EY7 689 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SGCZQ96LD1 299 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 YME1L1Q96TA2 773 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SMG9Q9H0W8 520 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 UBE2ZQ9H832 354 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 GTSE1Q9NYZ3 720 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 DSPPQ9NZW4 1301 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 GNPTGQ9UJJ9 305 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 MKL2Q9ULH7 1088 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 GPR52Q9Y2T5 361 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 MRPS18CQ9Y3D5 142 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 MYO10Q9HD67 2058 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 IGLV3-32A0A0A0MS00 114 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 C2orf78A6NCI8 922 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CASQ2O14958 399 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF185O15231 689 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 POLR3GO15318 223 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 FTCDO95954 541 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CYBBP04839 570 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SERPINF2P08697 491 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 NEFHP12036 1026 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF37AP17032 561 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CTNNB1P35222 781 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 AHRP35869 848 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 GATMP50440 423 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SESN3P58005 492 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 REEP5Q00765 189 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF177Q13360 481 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PCLAFQ15004 111 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 TPRG1LQ5T0D9 272 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CHST15Q7LFX5 561 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 FAM129CQ86XR2 697 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 TTC9BQ8N6N2 239 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 C1orf162Q8NEQ5 155 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 TOR1AIP2Q8NFQ8 470 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 OR2T34Q8NGX1 318 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 OR2L8Q8NGY9 312 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ATL1Q8WXF7 558 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ZCCHC2Q9C0B9 1178 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 BHLHE41Q9C0J9 482 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 NKX2-4Q9H2Z4 354 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 EPS8L2Q9H6S3 715 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SUSD2Q9UGT4 822 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 GRID1Q9ULK0 1009 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 EML6Q6ZMW3 1958 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PFDN6O15212 129 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ADAM23O75077 832 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 RETP07949 1114 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 EBLN1P0CF75 366 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 POLR2EP19388 210 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PKLRP30613 574 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CCT8P50990 548 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 TRAP1Q12931 704 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 MLF2Q15773 248 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 ZNF776Q68DI1 518 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SULT1C3Q6IMI6 304 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 GRHL2Q6ISB3 625 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 WDR74Q6RFH5 385 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CRTC1Q6UUV9 634 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SBSNQ6UWP8 590 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 IGDCC3Q8IVU1 814 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 FBXO39Q8N4B4 442 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 GLIS1Q8NBF1 620 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 AGR3Q8TD06 166 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SFXN5Q8TD22 340 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SH3RF2Q8TEC5 729 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 COQ8BQ96D53 544 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 RNF145Q96MT1 663 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 TACO1Q9BSH4 297 aaKnown RBP4.8□□□□□ -1.64
SCAF11-212ENST00000549162 C12orf10Q9HB07 376 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 RXFP3Q9NSD7 469 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 PLA2G4CQ9UP65 541 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 SPO11Q9Y5K1 396 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 CPQQ9Y646 472 aa4.8□□□□□ -1.64
SCAF11-212ENST00000549162 TYW5A2RUC4 315 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms