RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LOC285095A0A1B0GVY8 99 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 GNGT2O14610 69 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 VBP1P61758 197 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 BEX3Q00994 111 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 EPS8Q12929 822 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 ALFQ53S48 1182 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 PLEKHG7Q6ZR37 379 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 BEND5Q7L4P6 421 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 EFL1Q7Z2Z2 1120 aaKnown RBP13.53□□□□□ -0.24
HDAC7-228ENST00000548938 SLC7A5P1Q8MH63 180 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 MINDY2Q8NBR6 621 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 OR2T12Q8NG77 320 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 LPPQ93052 612 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 SLC47A1Q96FL8 570 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 GPR21Q99679 349 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 RBM4BQ9BQ04 359 aaKnown RBP13.53□□□□□ -0.24
HDAC7-228ENST00000548938 RBM4Q9BWF3 364 aaKnown RBP13.53□□□□□ -0.24
HDAC7-228ENST00000548938 ACTR8Q9H981 624 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 ABCC13Q9NSE7 274 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 VPS51Q9UID3 782 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 LCHNA4D1U4 455 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 MGEA5O60502 916 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 GMNNO75496 209 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 MLYCDO95822 493 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 CHRNA1P02708 482 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 GRIK1P39086 918 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 ARL1P40616 181 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-228ENST00000548938 MAP2K4P45985 399 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 FPGSQ05932 587 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 RAD51Q06609 339 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 MFSD10Q14728 455 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 PHKG1Q16816 387 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF691Q5VV52 312 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 NECAB2Q7Z6G3 386 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 SCD5Q86SK9 330 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 UMODL1-AS1Q8N2C9 162 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 SOCS4Q8WXH5 440 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 UGT2B28Q9BY64 529 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 IKZF5Q9H5V7 419 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 NMUR1Q9HB89 426 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 SYTL2Q9HCH5 934 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 SCHIP1Q9P0W5 487 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-228ENST00000548938 AASSQ9UDR5 926 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 KLQ9UEF7 1012 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 ADGRE2Q9UHX3 823 aa13.53□□□□□ -0.24
HDAC7-228ENST00000548938 A8MU76 341 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 GSTA4O15217 222 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 SLC22A1O15245 554 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 OGNP20774 298 aaKnown RBP13.52□□□□□ -0.24
HDAC7-228ENST00000548938 HK3P52790 923 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 MLLT6P55198 1093 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-228ENST00000548938 CACNB2Q08289 660 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-228ENST00000548938 TOP3AQ13472 1001 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-228ENST00000548938 PWP1Q13610 501 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 LETMD1Q6P1Q0 360 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 CYP20A1Q6UW02 462 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 LRRTM3Q86VH5 581 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF548Q8NEK5 533 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-228ENST00000548938 OR56A4Q8NGH8 313 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 OR10A6Q8NH74 314 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 MCOLN3Q8TDD5 553 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 CCDC115Q96NT0 180 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 SEMA3CQ99985 751 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 BTBD2Q9BX70 525 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 FBXO8Q9NRD0 319 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 TAS2R13Q9NYV9 303 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 ERVK-18Q9QC07 812 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 POLR3HQ9Y535 204 aaPredicted RBP13.52□□□□□ -0.24
HDAC7-228ENST00000548938 U3KQV3 271 aa13.52□□□□□ -0.24
HDAC7-228ENST00000548938 TTC3P53804 2025 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 SYCE1LA8MT33 242 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 STX16O14662 325 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 DNAJB5O75953 348 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 PRKD3O94806 890 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 MYO1DO94832 1006 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 GJA8P48165 433 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 TPTEP56180 551 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 ERVPABLB-1P60509 514 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 NCS1P62166 190 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 IL5RAQ01344 420 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 SELENBP1Q13228 472 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 TYSND1Q2T9J0 566 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 ADCK1Q86TW2 530 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 SLC22A16Q86VW1 577 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 OR6Q1Q8NGQ2 317 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 TADA1Q96BN2 335 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 TBCDQ9BTW9 1192 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 TRIM62Q9BVG3 475 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 C1QTNF3Q9BXJ4 246 aa13.52□□□□□ -0.25
HDAC7-228ENST00000548938 INTS6Q9UL03 887 aaKnown RBP13.52□□□□□ -0.25
HDAC7-228ENST00000548938 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
HDAC7-228ENST00000548938 WASH4PA8MWX3 477 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 HAS3O00219 553 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 ARNTLO00327 626 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 MUSKO15146 869 aa13.51□□□□□ -0.25
HDAC7-228ENST00000548938 THP07101 528 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms