RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CPSF4O95639 269 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ABCB1P08183 1280 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF7P17097 686 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 MTHFRP42898 656 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 CTSOP43234 321 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 RGS4P49798 205 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ANKRD26P1Q6NSI1 321 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 CCDC81Q6ZN84 652 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 CMTM8Q8IZV2 173 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 CENPNQ96H22 339 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 MUS81Q96NY9 551 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 MTG2Q9H4K7 406 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 HMX1Q9NP08 348 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 CCM2LQ9NUG4 571 aaPredicted RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 VAPAQ9P0L0 249 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 OAS3Q9Y6K5 1087 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 A0A1W2PPW3 197 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ASPDHA6ND91 283 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ITGALP20701 1170 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 HALP42357 657 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 TUFMP49411 452 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ACADVLP49748 655 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ERVK-8P63133 956 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 OR52E6Q96RD3 313 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 FEM1AQ9BSK4 669 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 C9orf16Q9BUW7 83 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 INTS10Q9NVR2 710 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ETAA1Q9NY74 926 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 ADGRE2Q9UHX3 823 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 SH3BP1Q9Y3L3 701 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 DGKBQ9Y6T7 804 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 A0A0C4DFX4 3053 aa13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 DICER1Q9UPY3 1922 aaKnown RBP13.45□□□□□ -0.26
PRPF40B-209ENST00000548825 AGRPO00253 132 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 E2F3O00716 465 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 NOL3O60936 208 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 CST1P01037 141 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 DTWD1Q8N5C7 304 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 TRPV3Q8NET8 790 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 MED8Q96G25 268 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 APOLD1Q96LR9 279 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF597Q96LX8 424 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 PAIP1Q9H074 479 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 PDFQ9HBH1 243 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 AIG1Q9NVV5 245 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 ACTR3BQ9P1U1 418 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 PNMA8BQ9ULN7 279 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 YIPF1Q9Y548 306 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 ZSWIM8A7E2V4 1837 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 SCN10AQ9Y5Y9 1956 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 ASLP04424 464 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 MAP4P27816 1152 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 POLR2IP36954 125 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 MAGEA11P43364 429 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 INHBEP58166 350 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 ZXDBP98169 803 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 TRAP1Q12931 704 aaKnown RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 BFSP2Q13515 415 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 DGCR6Q14129 220 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 TICAM1Q8IUC6 712 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 SCML4Q8N228 414 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 OR2T12Q8NG77 320 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 RHEBL1Q8TAI7 183 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 SELENOMQ8WWX9 145 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 EZH1Q92800 747 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 TMBIM1Q969X1 311 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 ASB2Q96Q27 587 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 TRIB3Q96RU7 358 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 PKD2L2Q9NZM6 624 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 RALGAPA2Q2PPJ7 1873 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 A0A1W2PRU2 124 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 H3BNH8 94 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 FKBP9O95302 570 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 FKBP9P1Q75LS8 142 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 NPAS4Q8IUM7 802 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 PHYKPLQ8IUZ5 450 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 TMEM199Q8N511 208 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 C2orf73Q8N5S3 287 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 RIN3Q8TB24 985 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 SORCS1Q8WY21 1168 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 EGLN2Q96KS0 407 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 FAM126AQ9BYI3 521 aaPredicted RBP13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 GALNT8Q9NY28 637 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 TSC2P49815 1807 aa13.44□□□□□ -0.26
PRPF40B-209ENST00000548825 EPOP01588 193 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 ENTPD1P49961 510 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 KPNA1P52294 538 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 SIM2Q14190 667 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 CXorf57Q6NSI4 855 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 KCTD8Q6ZWB6 473 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 SCAMP4Q969E2 229 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 MTERF1Q99551 399 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 CXorf21Q9HAI6 301 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms