RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FAM156AQ8NDB6 213 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 SETD6Q8TBK2 473 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 KLHL6Q8WZ60 621 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 HYLS1Q96M11 299 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 WDR18Q9BV38 432 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 CNPPD1Q9BV87 410 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 FOLH1BQ9HBA9 442 aa12.64□□□□□ -0.39
PTCH1-212ENST00000546744 CCNDBP1O95273 360 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 FGBP02675 491 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 VEGFAP15692 232 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ARHGDIBP52566 201 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 HERVK_113P63132 956 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 MTAPQ13126 283 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 NDUFA9Q16795 377 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CHSY3Q70JA7 882 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 C11orf96Q7Z7L8 435 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 RALGPS2Q86X27 583 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 OR4A15Q8NGL6 344 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 RHBDF1Q96CC6 855 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 MED8Q96G25 268 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CGREF1Q99674 301 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 SLC25A51Q9H1U9 297 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 SYNDIG1Q9H7V2 258 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 NKIRAS2Q9NYR9 191 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 SPTLC1O15269 473 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CILPO75339 1184 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 GPX6P59796 221 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 TBRG1Q3YBR2 411 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CRTC2Q53ET0 693 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 VN1R5Q7Z5H4 357 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 TIFAQ96CG3 184 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 GAD1Q99259 594 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 C2orf49Q9BVC5 232 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ACTR6Q9GZN1 396 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CCSER2Q9H7U1 834 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 RC3H2Q9HBD1 1191 aaKnown RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 UBQLN2Q9UHD9 624 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 C17orf102A2RUQ5 167 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 C2CD4BA6NLJ0 364 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 FOXO6A8MYZ6 492 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 PRRG1O14668 218 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 PIP5K1BO14986 540 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 MID1O15344 667 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CHP2O43745 196 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 NUAK1O60285 661 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ENTPD6O75354 484 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 OR5F1O95221 314 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 TRBC1P01850 177 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 HLA-DPB1P04440 258 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ALDH4A1P30038 563 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 L1CAMP32004 1257 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 TUFMP49411 452 aaKnown RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 DPYSL2Q16555 572 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 C6orf141Q5SZD1 244 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ARMC6Q6NXE6 501 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 PGBD2Q6P3X8 592 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 DDX53Q86TM3 631 aaKnown RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 KBTBD6Q86V97 674 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 TOP6BLQ8N6T0 577 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 PRMT6Q96LA8 375 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 S100A13Q99584 98 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 SEMA3CQ99985 751 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CDT1Q9H211 546 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 SNTG1Q9NSN8 517 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ARMC1Q9NVT9 282 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 CALML5Q9NZT1 146 aa12.63□□□□□ -0.39
PTCH1-212ENST00000546744 ZNF282Q9UDV7 671 aaPredicted RBP12.63□□□□□ -0.39
PTCH1-212ENST00000546744 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 FANCGO15287 622 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 STK16O75716 305 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 NFICP08651 508 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 BMP2P12643 396 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 CAMK1Q14012 370 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 NPY5RQ15761 445 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 ZNF614Q8N883 585 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 OR10A6Q8NH74 314 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 MRPS31Q92665 395 aaKnown RBP12.62□□□□□ -0.39
PTCH1-212ENST00000546744 CAMK1GQ96NX5 476 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 NTPCRQ9BSD7 190 aaKnown RBP12.62□□□□□ -0.39
PTCH1-212ENST00000546744 IFT27Q9BW83 186 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 ASB8Q9H765 288 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 KCTD5Q9NXV2 234 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 FNIP2Q9P278 1114 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 OR2B3O76000 313 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 OR6A2O95222 327 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 CCNYL3P0C7X3 344 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 ZNF33AQ06730 810 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 ABHD18Q0P651 414 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 SEMA3AQ14563 771 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 APOBEC3HQ6NTF7 200 aaKnown RBP12.62□□□□□ -0.39
PTCH1-212ENST00000546744 CYP4V2Q6ZWL3 525 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-212ENST00000546744 FAM35AQ86V20 835 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 ZFPM1Q8IX07 1006 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 TMEM199Q8N511 208 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 SLC37A3Q8NCC5 494 aa12.62□□□□□ -0.39
PTCH1-212ENST00000546744 DUSP16Q9BY84 665 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms