RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 GLT6D1Q7Z4J2 308 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 BPHLQ86WA6 291 aaPredicted RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 RHOT2Q8IXI1 618 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 KLHDC8BQ8IXV7 354 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 DSELQ8IZU8 1212 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 OR2L2Q8NH16 312 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 TFB1MQ8WVM0 346 aaKnown RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 THAP4Q8WY91 577 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 WWP1Q9H0M0 922 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 CHST8Q9H2A9 424 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 GOLPH3Q9H4A6 298 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 ABHD10Q9NUJ1 306 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 DDX56Q9NY93 547 aaKnown RBP12.24□□□□□ -0.45
COPS7A-221ENST00000546229 HACD3Q9P035 362 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 POMT2Q9UKY4 750 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 ARL5AQ9Y689 179 aa12.24□□□□□ -0.45
COPS7A-221ENST00000546229 MGAT4DA6NG13 374 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 PSTPIP1O43586 416 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 CST8O60676 142 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 MFAP3LO75121 409 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 SCRG1O75711 98 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 PRAMEF1O95521 474 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 ZBTB11O95625 1053 aaPredicted RBP12.23□□□□□ -0.45
COPS7A-221ENST00000546229 CCNYL3P0C7X3 344 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 HADHBP55084 474 aaKnown RBP12.23□□□□□ -0.45
COPS7A-221ENST00000546229 MPP3Q13368 585 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 ITGA9Q13797 1035 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 ZFYVE27Q5T4F4 411 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 DAAM2Q86T65 1068 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 SLC25A41Q8N5S1 370 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 OR8K1Q8NGG5 319 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 GDAP1Q8TB36 358 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 CPT1CQ8TCG5 803 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 BLOC1S5Q8TDH9 187 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 ZFPM2Q8WW38 1151 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 SEC14L1Q92503 715 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 PITPNM3Q9BZ71 974 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 ZCCHC2Q9C0B9 1178 aaKnown RBP12.23□□□□□ -0.45
COPS7A-221ENST00000546229 IMP3Q9NV31 184 aaKnown RBP12.23□□□□□ -0.45
COPS7A-221ENST00000546229 PCMTD2Q9NV79 361 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 HRASLS2Q9NWW9 162 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.23□□□□□ -0.45
COPS7A-221ENST00000546229 NUP210LQ5VU65 1888 aa12.23□□□□□ -0.45
COPS7A-221ENST00000546229 IGLV3-16A0A075B6K0 115 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 ARGFXA6NJG6 315 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 SEMA7AO75326 666 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 LCA5LO95447 670 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 RAB40ALP0C0E4 278 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 PBLDP30039 288 aaPredicted RBP12.22□□□□□ -0.45
COPS7A-221ENST00000546229 SLC1A1P43005 524 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 ARCN1P48444 511 aaKnown RBP12.22□□□□□ -0.45
COPS7A-221ENST00000546229 PRLHRP49683 370 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 ZNF140P52738 457 aaPredicted RBP12.22□□□□□ -0.45
COPS7A-221ENST00000546229 ITGA1P56199 1179 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 LLGL1Q15334 1064 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 FNBP1LQ5T0N5 605 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 KLHL35Q6PF15 583 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 RANBP10Q6VN20 620 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 DET1Q7L5Y6 550 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 ATCAYQ86WG3 371 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 OOSP2Q86WS3 158 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 KATNAL2Q8IYT4 538 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 IPMKQ8NFU5 416 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 OR8K5Q8NH50 307 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 OR1L3Q8NH93 324 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 C12orf66Q96MD2 445 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 VAT1Q99536 393 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 NUDT9Q9BW91 350 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 TLR10Q9BXR5 811 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 ING2Q9H160 280 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 GBA3Q9H227 469 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 NHEJ1Q9H9Q4 299 aaPredicted RBP12.22□□□□□ -0.45
COPS7A-221ENST00000546229 KCND1Q9NSA2 647 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 FARSAQ9Y285 508 aaKnown RBP12.22□□□□□ -0.45
COPS7A-221ENST00000546229 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.22□□□□□ -0.45
COPS7A-221ENST00000546229 SNRNP200O75643 2136 aaKnown RBP12.22□□□□□ -0.45
COPS7A-221ENST00000546229 ABCA12Q86UK0 2595 aa12.22□□□□□ -0.45
COPS7A-221ENST00000546229 SEC16AO15027 2179 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 OR6C74A6NCV1 312 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 AGTP01019 485 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 GABRA4P48169 554 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 PGDP52209 483 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 TRIM14Q14142 442 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 TFDP2Q14188 446 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 ESPL1Q14674 2120 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 PLCL1Q15111 1095 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 DENND5AQ6IQ26 1287 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 ZC3H18Q86VM9 953 aaKnown RBP12.21□□□□□ -0.45
COPS7A-221ENST00000546229 VSTM4Q8IW00 320 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 ZBTB2Q8N680 514 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 RBMXL3Q8N7X1 1067 aaKnown RBP12.21□□□□□ -0.45
COPS7A-221ENST00000546229 ENDOVQ8N8Q3 282 aaKnown RBP12.21□□□□□ -0.45
COPS7A-221ENST00000546229 FDCSPQ8NFU4 85 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 ZNF398Q8TD17 642 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 HAUS1Q96CS2 278 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 SLC25A23Q9BV35 468 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 MAK16Q9BXY0 300 aaKnown RBP12.21□□□□□ -0.45
COPS7A-221ENST00000546229 NLNQ9BYT8 704 aa12.21□□□□□ -0.45
COPS7A-221ENST00000546229 OR52A5Q9H2C5 316 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms