RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 FBXO6Q9NRD1 293 aaPredicted RBP18.92■□□□□ 0.62
SDR39U1-203ENST00000544691 IARS2Q9NSE4 1012 aaKnown RBP18.92■□□□□ 0.62
SDR39U1-203ENST00000544691 SLC17A6Q9P2U8 582 aa18.92■□□□□ 0.62
SDR39U1-203ENST00000544691 CEP295Q9C0D2 2601 aa18.92■□□□□ 0.62
SDR39U1-203ENST00000544691 COL27A1Q8IZC6 1860 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 NTN3O00634 580 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 RPS3P23396 243 aaKnown RBP eCLIP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 FMO4P31512 558 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 CCR7P32248 378 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 MPP1Q00013 466 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 CAV1Q03135 178 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 CBLBQ13191 982 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 RPE65Q16518 533 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 AMZ1Q400G9 498 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 CDCP2Q5VXM1 449 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 PTRHD1Q6GMV3 140 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 DUS1LQ6P1R4 473 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 TRIM48Q8IWZ4 208 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 CXorf40BQ96DE9 158 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 CERS2Q96G23 380 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 C12orf66Q96MD2 445 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 INSM2Q96T92 566 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 SLC38A3Q99624 504 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 OR52A5Q9H2C5 316 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 LRRN3Q9H3W5 708 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 RDH14Q9HBH5 336 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 IMP3Q9NV31 184 aaKnown RBP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 ATXN7L1Q9ULK2 861 aaPredicted RBP18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 KNTC1P50748 2209 aa18.91■□□□□ 0.62
SDR39U1-203ENST00000544691 ESPNB1AK53 854 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 VIPP01282 170 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 GSTM1P09488 218 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 SLC35G4P0C7Q5 338 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 GPR3P46089 330 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 CSE1LP55060 971 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 GSTM4Q03013 218 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 NKAIN2Q5VXU1 208 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 CAPRIN2Q6IMN6 1127 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 CAPN12Q6ZSI9 719 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 CCDC25Q86WR0 208 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 TMPRSS12Q86WS5 348 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 GALNT15Q8N3T1 639 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 CALML6Q8TD86 181 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 FAM136AQ96C01 138 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 FAM167BQ9BTA0 163 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 STN1Q9H668 368 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 L2HGDHQ9H9P8 463 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 SLC40A1Q9NP59 571 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 PPANQ9NQ55 473 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 ZDHHC18Q9NUE0 388 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 POT1Q9NUX5 634 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 INTS10Q9NVR2 710 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 KCNK4Q9NYG8 393 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 GNPTGQ9UJJ9 305 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 FBXO5Q9UKT4 447 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 CLCA2Q9UQC9 943 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 AKAP13Q12802 2813 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 UNC13CQ8NB66 2214 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 IGHV1OR21-1A0A087WYE8 117 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 SLC5A10A0PJK1 596 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 LIN7AO14910 233 aaPredicted RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 PFDN6O15212 129 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 NIPSNAP2O75323 286 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 MT-CO3P00414 261 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 JUPP14923 745 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 PDX1P52945 283 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 ADARP55265 1226 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 SPIDRQ14159 915 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 GLE1Q53GS7 698 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 TMPRSS9Q7Z410 1059 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 LRRC6Q86X45 466 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 LMNTD2Q8IXW0 634 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 PYROXD1Q8WU10 500 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 GFM1Q96RP9 751 aaKnown RBP18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 TBC1D10AQ9BXI6 508 aa18.9■□□□□ 0.62
SDR39U1-203ENST00000544691 WDFY3Q8IZQ1 3526 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 D6RAR5 112 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 EIF3HO15372 352 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 HAUS5O94927 633 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 MTHFD1P11586 935 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 CARSP49589 748 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 SHC2P98077 582 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 HSPA14Q0VDF9 509 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 TARDBPQ13148 414 aaKnown RBP eCLIP18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 RPA4Q13156 261 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 GPR18Q14330 331 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 DNTTIP2Q5QJE6 756 aaKnown RBP18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 CNSTQ6PJW8 725 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 TMEM26Q6ZUK4 368 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 USP53Q70EK8 1073 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 VRK3Q8IV63 474 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 SPNS2Q8IVW8 549 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 CNTN4Q8IWV2 1026 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 DCBLD1Q8N8Z6 715 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 AVL9Q8NBF6 648 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 C2CD4AQ8NCU7 369 aaPredicted RBP18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 GSDMBQ8TAX9 411 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 CDYLQ9Y232 598 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 VPS9D1Q9Y2B5 631 aa18.89■□□□□ 0.61
SDR39U1-203ENST00000544691 PCDHB1Q9Y5F3 818 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms