RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 PGM1P36871 562 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 HARS2P49590 506 aaKnown RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 NDST1P52848 882 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 INHBCP55103 352 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CLDN6P56747 220 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 ST8SIA6P61647 398 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 SRSF1Q07955 248 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 EFEMP1Q12805 493 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 SF3A3Q12874 501 aaKnown RBP eCLIP6.18□□□□□ -1.429e-6■■□□□ 12.4
CPSF7-222ENST00000544585 LY6DQ14210 128 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 SHBQ15464 509 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 GPR68Q15743 365 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF699Q32M78 642 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 GALNTL6Q49A17 601 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 MPP7Q5T2T1 576 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 ARTNQ5T4W7 220 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 DGAT2L7PQ6IED9 249 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 KDM7AQ6ZMT4 941 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CLEC20AQ6ZU45 233 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC186Q7Z3E2 898 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 PRPF39Q86UA1 669 aaKnown RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 ADIPOR2Q86V24 386 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 TRABD2AQ86V40 505 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 IQCHQ86VS3 1027 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CACUL1Q86Y37 369 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 FAM217AQ8IXS0 508 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 OR8H2Q8N162 312 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.18□□□□□ -1.424e-6■■■■■ 36.6
CPSF7-222ENST00000544585 C12orf29Q8N999 325 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 KDM1BQ8NB78 822 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 OR2T34Q8NGX1 318 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 KCNE4Q8WWG9 221 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 SORCS1Q8WY21 1168 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 RNF125Q96EQ8 232 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 HIC2Q96JB3 615 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 OMDQ99983 421 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 DUSP16Q9BY84 665 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 PANK2Q9BZ23 570 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 RSPH9Q9H1X1 276 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 NEUROG2Q9H2A3 272 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 SEC61A2Q9H9S3 476 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 VSX1Q9NZR4 365 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CTTNBP2NLQ9P2B4 639 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 RASAL2Q9UJF2 1139 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 FZD4Q9ULV1 537 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 CLEC4EQ9ULY5 219 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 HEMK1Q9Y5R4 338 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-222ENST00000544585 WDFY3Q8IZQ1 3526 aa6.18□□□□□ -1.42
CPSF7-222ENST00000544585 NUMA1Q14980 2115 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3DA0A087WVF3 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3IA0A087WXS9 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3EA0A087X179 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3KA0A087X1G2 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3FA6NER0 549 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3LB9A6J9 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 F5H697 171 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 IKBKBO14920 756 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 KLK10O43240 276 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TGFB1I1O43294 461 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 EXOC3O60645 756 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TIPRLO75663 272 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TMEM63AO94886 807 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SUN1O94901 812 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 LATS1O95835 1130 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 HMBSP08397 361 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3HP0C7X1 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SFTPCP11686 197 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CCDC130P13994 396 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 GOT1P17174 413 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CHMP24386 653 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 ADORA2BP29275 332 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 EPHA3P29320 983 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 RBMS1P29558 406 aaKnown RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 HLA-FP30511 346 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 STAT6P42226 847 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 POLD2P49005 469 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 ANXA11P50995 505 aaKnown RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 DUSP3P51452 185 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SLC8A3P57103 927 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 NXPH1P58417 271 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 NHLH2Q02577 135 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 PDCLQ13371 301 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CCNG2Q16589 344 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TSTQ16762 297 aaKnown RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SFMBT2Q5VUG0 894 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3GQ6DHY5 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3CQ6IPX1 549 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 NCEH1Q6PIU2 408 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CLEC9AQ6UXN8 241 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 CLNKQ7Z7G1 428 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 SCD5Q86SK9 330 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 ARMC8Q8IUR7 673 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 C12orf56Q8IXR9 622 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 TBC1D3Q8IZP1 549 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 ZNF483Q8TF39 744 aaPredicted RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 P2RY11Q96G91 374 aa6.17□□□□□ -1.42
CPSF7-222ENST00000544585 NAF1Q96HR8 494 aaKnown RBP6.17□□□□□ -1.42
CPSF7-222ENST00000544585 RSRC1Q96IZ7 334 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms