RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 KBTBD8Q8NFY9 601 aa12.64□□□□□ -0.39
CHD4-211ENST00000544484 CRNNQ9UBG3 495 aaPredicted RBP12.64□□□□□ -0.39
CHD4-211ENST00000544484 CORO1CQ9ULV4 474 aaPredicted RBP12.64□□□□□ -0.39
CHD4-211ENST00000544484 IFT172Q9UG01 1749 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 TPST2O60704 377 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 POU2F1P14859 743 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 OGNP20774 298 aaKnown RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 ATP13A5Q4VNC0 1218 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 PIK3C3Q8NEB9 887 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 LRTOMTQ8WZ04 291 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 TP53INP1Q96A56 240 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 SHISA4Q96DD7 197 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 ART5Q96L15 291 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 C12orf66Q96MD2 445 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.63□□□□□ -0.395e-9■□□□□ 8.2
CHD4-211ENST00000544484 DYTNA2CJ06 578 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 TNFRSF11BO00300 401 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 KLHL18O94889 574 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 TCEA1P23193 301 aaKnown RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 ADCY4Q8NFM4 1077 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 MTPNP58546 118 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 POU5F1Q01860 360 aaKnown RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 PCDH1Q08174 1060 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 SLC9B1Q4ZJI4 515 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 EEF1AKMT1Q8WVE0 214 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 UNC93B1Q9H1C4 597 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 FANCEQ9HB96 536 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 GPN3Q9UHW5 284 aaPredicted RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 SSR3Q9UNL2 185 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 FABP3P05413 133 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 RGS8P57771 180 aaPredicted RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 SLC35F5Q8WV83 523 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 SSU72Q9NP77 194 aaKnown RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 PNPLA8Q9NP80 782 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 SLC2A6Q9UGQ3 507 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 SRRDQ9UH36 339 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 HS3ST4Q9Y661 456 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 SESN1Q9Y6P5 492 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 FECHP22830 423 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 WDR4P57081 412 aaKnown RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 MADCAM1Q13477 382 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 KHDC1Q4VXA5 237 aaKnown RBP12.63□□□□□ -0.39
CHD4-211ENST00000544484 CARD16Q5EG05 197 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 GPR65Q8IYL9 337 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 FAM110BQ8TC76 370 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 C1GALT1C1Q96EU7 318 aa12.63□□□□□ -0.39
CHD4-211ENST00000544484 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 TAB1Q15750 504 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 SNAPC1Q16533 368 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 PPP2R2DQ66LE6 453 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 ERICH5Q6P6B1 374 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 BEND5Q7L4P6 421 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 C11orf65Q8NCR3 313 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 SRFBP1Q8NEF9 429 aaKnown RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 COQ7Q99807 217 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 CADM1Q9BY67 442 aaKnown RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 TESMINQ9Y4I5 508 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 LRRC72A6NJI9 287 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 LIN7AO14910 233 aaPredicted RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 ERN1O75460 977 aaKnown RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 RFTN2Q52LD8 501 aaPredicted RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 SIRPB2Q5JXA9 342 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 OLFML1Q6UWY5 402 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 LYSMD3Q7Z3D4 306 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 C11orf84Q9BUA3 381 aaPredicted RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 SUV39H2Q9H5I1 410 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 PRDM8Q9NQV8 689 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 SUCOQ9UBS9 1254 aaKnown RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 RWDD3Q9Y3V2 267 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 NADKO95544 446 aaPredicted RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 NR4A1P22736 598 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 PRKCHP24723 683 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 MYL9P24844 172 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 ECT2LQ008S8 904 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 RGS21Q2M5E4 152 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 RPTNQ6XPR3 784 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 ARHGAP22Q7Z5H3 698 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 C5orf34Q96MH7 638 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 RACGAP1Q9H0H5 632 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 INTS10Q9NVR2 710 aaKnown RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 C1orf109Q9NX04 203 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 GABRDO14764 452 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 AXIN1O15169 862 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 SLC35G6P0C7Q6 338 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 MAGP20916 626 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 PSMD7P51665 324 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 LGALS3BPQ08380 585 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 DPYSQ14117 519 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 RTL4Q6ZR62 310 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 CYP2U1Q7Z449 544 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 MMAAQ8IVH4 418 aaKnown RBP12.62□□□□□ -0.39
CHD4-211ENST00000544484 ARL10Q8N8L6 244 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 LRRC15Q8TF66 581 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 BCKDKO14874 412 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 NPHS1O60500 1241 aa12.62□□□□□ -0.39
CHD4-211ENST00000544484 C8GP07360 202 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms