RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 RBM12BQ8IXT5 1001 aaKnown RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 UNC5BQ8IZJ1 945 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 Q8N9G6 341 aaPredicted RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 NOA1Q8NC60 698 aaKnown RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 MNS1Q8NEH6 495 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 SPDYE1Q8NFV5 336 aaPredicted RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 GRAMD1AQ96CP6 724 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 DEPDC7Q96QD5 511 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 INSM2Q96T92 566 aaPredicted RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 PHACTR1Q9C0D0 580 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 WWP1Q9H0M0 922 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 EPB41L5Q9HCM4 733 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 INTS10Q9NVR2 710 aaKnown RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 PSMD13Q9UNM6 376 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 PRAMEF33A0A0G2JMD5 474 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 NDUFS3O75489 264 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 PDHA2P29803 388 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 ALDH4A1P30038 563 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 CCR7P32248 378 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 CD151P48509 253 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 ZFP36L1Q07352 338 aaKnown RBP18.7■□□□□ 0.58
DDX55-211ENST00000544429 CALCOCO2Q13137 446 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 FASTKD3Q14CZ7 662 aaKnown RBP18.7■□□□□ 0.58
DDX55-211ENST00000544429 CTSL3PQ5NE16 218 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 ZNF470Q6ECI4 717 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 C8orf74Q6P047 294 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 UNC5AQ6ZN44 842 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 ZNF761Q86XN6 746 aaPredicted RBP18.7■□□□□ 0.58
DDX55-211ENST00000544429 SLITRK4Q8IW52 837 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 DENND6AQ8IWF6 608 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 CNTN4Q8IWV2 1026 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 LKAAEAR1Q8TD35 194 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 ZFPM2Q8WW38 1151 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 GFM1Q96RP9 751 aaKnown RBP18.7■□□□□ 0.58
DDX55-211ENST00000544429 STN1Q9H668 368 aaKnown RBP18.7■□□□□ 0.58
DDX55-211ENST00000544429 C20orf96Q9NUD7 363 aaPredicted RBP18.7■□□□□ 0.58
DDX55-211ENST00000544429 CDYLQ9Y232 598 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 ENTPD2Q9Y5L3 495 aa18.7■□□□□ 0.58
DDX55-211ENST00000544429 IQCF5A8MTL0 148 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 F8W8V4 182 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 EIF3HO15372 352 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX55-211ENST00000544429 ZW10O43264 779 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 CSO75390 466 aaKnown RBP18.69■□□□□ 0.58
DDX55-211ENST00000544429 GPC4O75487 556 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 CPNE6O95741 557 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 VIPP01282 170 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 CAPNS1P04632 268 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 SLC35G4P0C7Q5 338 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 AOAHP28039 575 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 ACADLP28330 430 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 CCKBRP32239 447 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 CSF2RBP32927 897 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 PLOD1Q02809 727 aaPredicted RBP18.69■□□□□ 0.58
DDX55-211ENST00000544429 CAV1Q03135 178 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 GPR18Q14330 331 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 ZNF789Q5FWF6 425 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 ZNF574Q6ZN55 896 aaPredicted RBP18.69■□□□□ 0.58
DDX55-211ENST00000544429 B3GNT8Q7Z7M8 397 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 KCNMB4Q86W47 210 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 FBXO25Q8TCJ0 367 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 CALML6Q8TD86 181 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 SLC38A3Q99624 504 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 EPB41L1Q9H4G0 881 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 KCNK4Q9NYG8 393 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 OGFRQ9NZT2 677 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 PDP2Q9P2J9 529 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 FAM8A1Q9UBU6 413 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 ZC3H7BQ9UGR2 993 aaKnown RBP18.69■□□□□ 0.58
DDX55-211ENST00000544429 GNPTGQ9UJJ9 305 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 CHMP2BQ9UQN3 213 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 VPS9D1Q9Y2B5 631 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 PCDHB1Q9Y5F3 818 aa18.69■□□□□ 0.58
DDX55-211ENST00000544429 TPRP12270 2363 aaKnown RBP18.68■□□□□ 0.58
DDX55-211ENST00000544429 A0A1W2PNU3 283 aaPredicted RBP18.68■□□□□ 0.58
DDX55-211ENST00000544429 CTAGE15A4D2H0 777 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 ESR1P03372 595 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 CTAGE8P0CG41 777 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 SLC1A2P43004 574 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 PREPP48147 710 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 SLC7A5Q01650 507 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 PDIA2Q13087 525 aaKnown RBP18.68■□□□□ 0.58
DDX55-211ENST00000544429 CTBP1Q13363 440 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 BIRC2Q13490 618 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 THOC5Q13769 683 aaKnown RBP18.68■□□□□ 0.58
DDX55-211ENST00000544429 HSP90AA5PQ58FG0 334 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 HP1BP3Q5SSJ5 553 aaPredicted RBP18.68■□□□□ 0.58
DDX55-211ENST00000544429 GALNT7Q86SF2 657 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 CTAGE6Q86UF2 777 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 PDZD3Q86UT5 571 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 CTAGE4Q8IX94 777 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 C2CD4AQ8NCU7 369 aaPredicted RBP18.68■□□□□ 0.58
DDX55-211ENST00000544429 ELMO1Q92556 727 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 CXorf40BQ96DE9 158 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 CERS2Q96G23 380 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 C12orf66Q96MD2 445 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 NUDT22Q9BRQ3 303 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 FAM167BQ9BTA0 163 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 TBC1D10AQ9BXI6 508 aa18.68■□□□□ 0.58
DDX55-211ENST00000544429 LATS2Q9NRM7 1088 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms