RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SYT6Q5T7P8 510 aaPredicted RBP12.5□□□□□ -0.41
SMG8-202ENST00000543872 CTRB2Q6GPI1 263 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 EFCAB12Q6NXP0 572 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 DET1Q7L5Y6 550 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
SMG8-202ENST00000543872 FNDC5Q8NAU1 212 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 OR10A6Q8NH74 314 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 TRIM63Q969Q1 353 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 ACOT13Q9NPJ3 140 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 ABI2Q9NYB9 513 aaPredicted RBP12.5□□□□□ -0.41
SMG8-202ENST00000543872 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 TNFSF13BQ9Y275 285 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 HPRP00739 348 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 CYP2C8P10632 490 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 GADD45AP24522 165 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 PRDX3P30048 256 aaKnown RBP12.5□□□□□ -0.41
SMG8-202ENST00000543872 PTGS2P35354 604 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 DCTP40126 519 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 FCGRTP55899 365 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 RCAN2Q14206 197 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 Q5BKY6 102 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 SPANXN2Q5MJ10 180 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 PNCKQ6P2M8 343 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 FAM126BQ8IXS8 530 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 AMER2Q8N7J2 671 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 OR5H6Q8NGV6 325 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 ANGPTL6Q8NI99 470 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 RMDN1Q96DB5 314 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 SIK2Q9H0K1 926 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 C12orf10Q9HB07 376 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 COQ3Q9NZJ6 369 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 CNTNAP1P78357 1384 aa12.5□□□□□ -0.41
SMG8-202ENST00000543872 ASB14A6NK59 587 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 CLDN5O00501 218 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 KRT6AP02538 564 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 KRT6BP04259 564 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 TXNP10599 105 aaKnown RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 LIPAP38571 399 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 GALNT1Q10472 559 aaPredicted RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 LY6KQ17RY6 165 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 TCAIMQ8N3R3 496 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 TSPAN17Q96FV3 270 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 ST6GAL2Q96JF0 529 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 Q96MT0 163 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 FYTTD1Q96QD9 318 aaKnown RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 KCNS3Q9BQ31 491 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 CDH9Q9ULB4 789 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 GINS2Q9Y248 185 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 RWDD3Q9Y3V2 267 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 GMPPBQ9Y5P6 360 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 TYW5A2RUC4 315 aaKnown RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 SUPT3HB4E1H0 165 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 EEDO75530 441 aaKnown RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 SLC35A2P78381 396 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 PLEKHG6Q3KR16 790 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 TRIM60Q495X7 471 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 SDE2Q6IQ49 451 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 LRRC8DQ7L1W4 858 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 CNTN4Q8IWV2 1026 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 OR2T12Q8NG77 320 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 RDH12Q96NR8 316 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 PSKH2Q96QS6 385 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 PHOX2BQ99453 314 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 BCL7BQ9BQE9 202 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 NAALAD2Q9Y3Q0 740 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 SLC12A8A0AV02 714 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 LOC110117498-PIK3R3F6TDL0 507 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 I6L893 689 aaPredicted RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 ENPP3O14638 875 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 IGFBP5P24593 272 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 AZGP1P25311 298 aaKnown RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 TKTL1P51854 596 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 CD83Q01151 205 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 KRR1Q13601 381 aaKnown RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 TAB1Q15750 504 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 OTUD1Q5VV17 481 aaPredicted RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 DENND5AQ6IQ26 1287 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 UBQLNLQ8IYU4 475 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 SEPT1Q8WYJ6 367 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 WNT8BQ93098 351 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 RNF34Q969K3 372 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 BARD1Q99728 777 aaKnown RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 FDXACB1Q9BRP7 624 aaPredicted RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 ASB7Q9H672 318 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 RANGRFQ9HD47 186 aaPredicted RBP12.49□□□□□ -0.41
SMG8-202ENST00000543872 NDFIP2Q9NV92 336 aa12.49□□□□□ -0.41
SMG8-202ENST00000543872 NRCAMQ92823 1304 aa12.48□□□□□ -0.41
SMG8-202ENST00000543872 B8ZZF3 427 aa12.48□□□□□ -0.41
SMG8-202ENST00000543872 DFNA5O60443 496 aa12.48□□□□□ -0.41
SMG8-202ENST00000543872 POLR2CP19387 275 aaPredicted RBP12.48□□□□□ -0.41
SMG8-202ENST00000543872 CYP4F2P78329 520 aa12.48□□□□□ -0.41
SMG8-202ENST00000543872 MBTD1Q05BQ5 628 aa12.48□□□□□ -0.41
SMG8-202ENST00000543872 CYP4F3Q08477 520 aa12.48□□□□□ -0.41
SMG8-202ENST00000543872 DALRD3Q5D0E6 543 aaKnown RBP12.48□□□□□ -0.41
SMG8-202ENST00000543872 TUBA3EQ6PEY2 450 aa12.48□□□□□ -0.41
SMG8-202ENST00000543872 EFL1Q7Z2Z2 1120 aaKnown RBP12.48□□□□□ -0.41
SMG8-202ENST00000543872 GALNT7Q86SF2 657 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms