RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 BST1Q10588 318 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 LCP2Q13094 533 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CBX2Q14781 532 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF311Q5JNZ3 666 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ADNP2Q6IQ32 1131 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF621Q6ZSS3 439 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RTL10Q7L3V2 364 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 PRICKLE2Q7Z3G6 844 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 UBR7Q8N806 425 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ZUFSPQ96AP4 578 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ULBP1Q9BZM6 244 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 IL25Q9H293 177 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CNTN3Q9P232 1028 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 C19orf25Q9UFG5 118 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 VWA7Q9Y334 891 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 NAV1Q8NEY1 1877 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SLC30A4O14863 429 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SLC7A4O43246 635 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RGS20O76081 388 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 IGFBP5P24593 272 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 GRIA3P42263 894 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 KLF10Q13118 480 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 KLHL24Q6TFL4 600 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RINLQ6ZS11 566 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 C10orf107Q8IVU9 208 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 IQCKQ8N0W5 287 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 KLHL23Q8NBE8 558 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 PEX13Q92968 403 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 AGAP2Q99490 1192 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 HNRNPABQ99729 332 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 MIOSQ9NXC5 875 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 PTGFRNQ9P2B2 879 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CFAP97Q9P2B7 532 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 MGAT4AQ9UM21 535 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 PHF24Q9UPV7 400 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 HSPE1-MOB4S4R3N1 261 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RGPD1P0DJD0 1748 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 A0A0J9YYE9 177 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TCRBV9S1A1TA0A576 114 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ELOVL7A1L3X0 281 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ZNF99A8MXY4 864 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SLC16A5O15375 505 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 AKAP8O43823 692 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CLEC3AO75596 197 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 UBA1P22314 1058 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 UGT1A3P35503 534 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 GPR1P46091 355 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 GNPDA1P46926 289 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TAS2R41P59536 307 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 IRF8Q02556 426 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 COL13A1Q5TAT6 717 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SYCE2Q6PIF2 218 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RPTNQ6XPR3 784 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 HACD2Q6Y1H2 254 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 KBTBD6Q86V97 674 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CYP4X1Q8N118 509 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 OR52K1Q8NGK4 314 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 KLHDC7BQ96G42 594 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ERMAPQ96PL5 475 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 MAPKAP1Q9BPZ7 522 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TRPV5Q9NQA5 729 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 AGPAT4Q9NRZ5 378 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 AGO1Q9UL18 857 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 FZD1Q9UP38 647 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RGPD8O14715 1765 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 A0A0X1KG70 313 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ARHGEF33A8MVX0 844 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 PSMD11O00231 422 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 MAGEB3O15480 346 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TMCC2O75069 709 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SHBGP04278 402 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TP53P04637 393 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 DRD1P21728 446 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 NDUFS1P28331 727 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 STARP49675 285 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RORCP51449 518 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 C3orf67Q6ZVT6 689 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 VASH1Q7L8A9 365 aaPredicted RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 FAM35AQ86V20 835 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 PM20D2Q8IYS1 436 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 POMGNT2Q8NAT1 580 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 OR2T12Q8NG77 320 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 UFD1Q92890 307 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 MND1Q9BWT6 205 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TTYH3Q9C0H2 523 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 LRTM1Q9HBL6 345 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 WDR6Q9NNW5 1121 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TRMT13Q9NUP7 481 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 NENFQ9UMX5 172 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RPL36Q9Y3U8 105 aaKnown RBP7.72□□□□□ -1.17
VPS13D-211ENST00000543710 RFXANKO14593 260 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ESR1P03372 595 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 PTGER3P43115 390 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 MASP1P48740 699 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 SCGB2A2Q13296 93 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 TEX44Q53QW1 395 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ABHD15Q6UXT9 468 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 ADGRD2Q7Z7M1 963 aa7.72□□□□□ -1.17
VPS13D-211ENST00000543710 CYP2W1Q8TAV3 490 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms