RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 IYDQ6PHW0 289 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 DBX2Q6ZNG2 339 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 FAM83HQ6ZRV2 1179 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 C11orf96Q7Z7L8 435 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 PIP4P1Q86T03 277 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 SLC26A11Q86WA9 606 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 NAGSQ8N159 534 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 ARL14Q8N4G2 192 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 ZBTB2Q8N680 514 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 Q8N9G6 341 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 FAM181AQ8N9Y4 354 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CFAP61Q8NHU2 1237 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 FAM45AQ8TCE6 357 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 SLC37A2Q8TED4 501 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 UBLCP1Q8WVY7 318 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 ASZ1Q8WWH4 475 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 PATE1Q8WXA2 126 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 NAT6Q93015 286 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 SH3KBP1Q96B97 665 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 LINC00615Q96LM1 132 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 FOPNLQ96NB1 174 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 FERD3LQ96RJ6 166 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CYTH2Q99418 400 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 NDNQ99608 321 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 SLC38A3Q99624 504 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CCDC77Q9BR77 488 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 WDR83Q9BRX9 315 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 P2RY12Q9H244 342 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 ANKZF1Q9H8Y5 726 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 LRRC4CQ9HCJ2 640 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 SLC17A6Q9P2U8 582 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 LRIT1Q9P2V4 623 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 TRMT6Q9UJA5 497 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 ST14Q9Y5Y6 855 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 HEBP2Q9Y5Z4 205 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CFAP20Q9Y6A4 193 aaKnown RBP6.19□□□□□ -1.42
LTBR-212ENST00000543542 COLEC10Q9Y6Z7 277 aa6.19□□□□□ -1.42
LTBR-212ENST00000543542 CACNA1HO95180 2353 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 COL5A1P20908 1838 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 CACNA1EQ15878 2313 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 FAM95CA0A1B0GW59 222 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 EME2A4GXA9 379 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 GIPC1O14908 333 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 SGTAO43765 313 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 KDM1AO60341 852 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 NOBOXO60393 691 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CBFA2T3O75081 653 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 PIAS1O75925 651 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 EML2O95834 649 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 RPN2P04844 631 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 FAM153BP0C7A2 387 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 FTH1P19P0C7X4 201 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 GIMD1P0DJR0 217 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 GLB1P16278 677 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 AMD1P17707 334 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 ACP1P24666 158 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 AOAHP28039 575 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 ECHS1P30084 290 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 HOXD11P31277 338 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 CCR7P32248 378 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 SPRP35270 261 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 GP5P40197 560 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 RGS4P49798 205 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 ADARP55265 1226 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 VSNL1P62760 191 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 ILF2Q12905 390 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 ABRQ12979 859 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 RPA4Q13156 261 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CBLBQ13191 982 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 NAB1Q13506 487 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CLCA4Q14CN2 919 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 EFTUD2Q15029 972 aaKnown RBP eCLIP6.18□□□□□ -1.426e-7■■■■■ 47.1
LTBR-212ENST00000543542 RPE65Q16518 533 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 KLHL38Q2WGJ6 581 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 AMZ1Q400G9 498 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 FAM153CQ494X1 144 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 MAP9Q49MG5 647 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 PPM1JQ5JR12 505 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 PLEKHS1Q5SXH7 462 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 GRTP1Q5TC63 336 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 HECTD2Q5U5R9 776 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 AGAP9Q5VTM2 703 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 DUS1LQ6P1R4 473 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 OGFOD3Q6PK18 319 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 ABRAXAS1Q6UWZ7 409 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 WASH2PQ6VEQ5 465 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CCNI2Q6ZMN8 369 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 TRMT10CQ7L0Y3 403 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 TAOK1Q7L7X3 1001 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 DGLUCYQ7Z3D6 616 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 ZNF761Q86XN6 746 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 SFTPA2Q8IWL1 248 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 CNTN4Q8IWV2 1026 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 LILRA3Q8N6C8 439 aaPredicted RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 EIF1ADQ8N9N8 165 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 SIDT2Q8NBJ9 832 aaKnown RBP6.18□□□□□ -1.42
LTBR-212ENST00000543542 GPR156Q8NFN8 814 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 LKAAEAR1Q8TD35 194 aa6.18□□□□□ -1.42
LTBR-212ENST00000543542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms