RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 TCP1P17987 556 aaKnown RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 PTPN3P26045 913 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 RBL1P28749 1068 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 SERPINA4P29622 427 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 CD6P30203 668 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 P2RY2P41231 377 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 RGRP47804 291 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 MAP2K6P52564 334 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 AP1S1P61966 158 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 BCL2L1Q07817 233 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 TCF15Q12870 199 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 IFT88Q13099 833 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 ZBTB17Q13105 803 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 SEMA3AQ14563 771 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 TEX44Q53QW1 395 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF805Q5CZA5 627 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 RALGPS1Q5JS13 557 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 CNSTQ6PJW8 725 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 SLC36A4Q6YBV0 504 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 PRR23BQ6ZRT6 265 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 C22orf34Q6ZV56 151 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 USP30Q70CQ3 517 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 KRT74Q7RTS7 529 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 PID1Q7Z2X4 250 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 KBTBD6Q86V97 674 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF619Q8N2I2 560 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 PGBD5Q8N414 524 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 ZBTB44Q8NCP5 570 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 C1orf54Q8WWF1 131 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 GAB3Q8WWW8 586 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 ST8SIA4Q92187 359 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 CNDP2Q96KP4 475 aaKnown RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 Q96M66 194 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 CCDC140Q96MF4 163 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 ZNF641Q96N77 438 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 KLHL32Q96NJ5 620 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 AGAP3Q96P47 875 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 VAT1Q99536 393 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 IL12RB2Q99665 862 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 SEMA3CQ99985 751 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 MCMBPQ9BTE3 642 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 CD244Q9BZW8 370 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 NEUROG2Q9H2A3 272 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 C10orf88Q9H8K7 445 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 IPPKQ9H8X2 491 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 NOD2Q9HC29 1040 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 HOMER3Q9NSC5 361 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 USP36Q9P275 1121 aaKnown RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 KLHL8Q9P2G9 620 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 R3HDM2Q9Y2K5 976 aaKnown RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 NPFFR2Q9Y5X5 522 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 MUC22E2RYF6 1773 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 EP300Q09472 2414 aaPredicted RBP5.09□□□□□ -1.59
CLIP1-217ENST00000543205 KMT2EQ8IZD2 1858 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 ATRXP46100 2492 aa5.09□□□□□ -1.59
CLIP1-217ENST00000543205 IGHV1OR15-9A0A0B4J2B8 117 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 BCLAF3A2AJT9 711 aaKnown RBP5.09□□□□□ -1.6
CLIP1-217ENST00000543205 FAM47DPA6NHR8 397 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 LRRC72A6NJI9 287 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 C16orf96A6NNT2 1141 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 RNF103O00237 685 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 PGRMC1O00264 195 aaKnown RBP5.09□□□□□ -1.6
CLIP1-217ENST00000543205 PLK4O00444 970 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 CES2O00748 559 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 KCNN4O15554 427 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 LIASO43766 372 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 RHOBTB1O94844 696 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 PIGNO95427 931 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 THBDP07204 575 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 SERPINF2P08697 491 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 PRLRP16471 622 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 CA4P22748 312 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 HNF4AP41235 474 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 METAP1P53582 386 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 DSC2Q02487 901 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 CNTN1Q12860 1018 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 SRSF5Q13243 272 aaKnown RBP5.09□□□□□ -1.6
CLIP1-217ENST00000543205 SNX1Q13596 522 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 PAPD7Q5XG87 772 aaKnown RBP5.09□□□□□ -1.6
CLIP1-217ENST00000543205 NCEH1Q6PIU2 408 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 SYT10Q6XYQ8 523 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 ERN2Q76MJ5 926 aaKnown RBP5.09□□□□□ -1.6
CLIP1-217ENST00000543205 LPCAT2Q7L5N7 544 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 TTC7BQ86TV6 843 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 CAMK1DQ8IU85 385 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 RASGEF1CQ8N431 466 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 AADATQ8N5Z0 425 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 FRMD1Q8N878 549 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 FAM71DQ8N9W8 422 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 OR14C36Q8NHC7 312 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 NETO1Q8TDF5 533 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 ACTRT1Q8TDG2 376 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 HCAR2Q8TDS4 363 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 PDCD6IPQ8WUM4 868 aaKnown RBP5.09□□□□□ -1.6
CLIP1-217ENST00000543205 ATG4AQ8WYN0 398 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 ARRDC3Q96B67 414 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 TOE1Q96GM8 510 aaKnown RBP5.09□□□□□ -1.6
CLIP1-217ENST00000543205 MS4A14Q96JA4 679 aa5.09□□□□□ -1.6
CLIP1-217ENST00000543205 C16orf45Q96MC5 204 aaPredicted RBP5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms