RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 TTC25Q96NG3 672 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 NUDT9Q9BW91 350 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 MAK16Q9BXY0 300 aaKnown RBP15.07■□□□□ 0
CLSTN3-213ENST00000541953 GPR87Q9BY21 358 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 MFRPQ9BY79 579 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 MAP4K5Q9Y4K4 846 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 A1L4Q6 167 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 CST8O60676 142 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 CEACAM4O75871 244 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 AGFG2O95081 481 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 PRAMEF1O95521 474 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 AGTP01019 485 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 POLR2CP19387 275 aaPredicted RBP15.06■□□□□ 0
CLSTN3-213ENST00000541953 COMTP21964 271 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 RORAP35398 523 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 XRCC4Q13426 336 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 ESPL1Q14674 2120 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 LDLRAP1Q5SW96 308 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 CCDC70Q6NSX1 233 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 DSELQ8IZU8 1212 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 GALNT11Q8NCW6 608 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 FDCSPQ8NFU4 85 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 OR1L3Q8NH93 324 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 TFB1MQ8WVM0 346 aaKnown RBP15.06■□□□□ 0
CLSTN3-213ENST00000541953 FCRL4Q96PJ5 515 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 TRABDQ9H4I3 376 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 SMOXQ9NWM0 555 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 KLHL8Q9P2G9 620 aaPredicted RBP15.06■□□□□ 0
CLSTN3-213ENST00000541953 FKBPLQ9UIM3 349 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 FARSAQ9Y285 508 aaKnown RBP15.06■□□□□ 0
CLSTN3-213ENST00000541953 BTRCQ9Y297 605 aa15.06■□□□□ 0
CLSTN3-213ENST00000541953 PCDHGA9Q9Y5G4 932 aaKnown RBP15.06■□□□□ 0
CLSTN3-213ENST00000541953 SLC9B1P1A6NJY1 282 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 CCL22O00626 93 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 VPS4BO75351 444 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 ZBTB11O95625 1053 aaPredicted RBP15.05■□□□□ -0
CLSTN3-213ENST00000541953 POLBP06746 335 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 ZFXP17010 805 aaPredicted RBP15.05■□□□□ -0
CLSTN3-213ENST00000541953 AKT1P31749 480 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 ARL4DP49703 201 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 FOXL2P58012 376 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 RAPSNQ13702 412 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 PTCHD3Q3KNS1 767 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 LRRC38Q5VT99 294 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 IZUMO3Q5VZ72 239 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 SPOCD1Q6ZMY3 1216 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 OOSP2Q86WS3 158 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 KMT5CQ86Y97 462 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 RBMXL3Q8N7X1 1067 aaKnown RBP15.05■□□□□ -0
CLSTN3-213ENST00000541953 DTX3LQ8TDB6 740 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 THAP4Q8WY91 577 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 IQCDQ96DY2 449 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 FCRL5Q96RD9 977 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 CD180Q99467 661 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 APOL2Q9BQE5 337 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 ZCCHC2Q9C0B9 1178 aaKnown RBP15.05■□□□□ -0
CLSTN3-213ENST00000541953 KLHL25Q9H0H3 589 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 KIR3DX1Q9H7L2 352 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 ACSS2Q9NR19 701 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 KCND1Q9NSA2 647 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 PCMTD2Q9NV79 361 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 SOHLH2Q9NX45 425 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 VPS4AQ9UN37 437 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 TFR2Q9UP52 801 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 CCDC88CQ9P219 2028 aa15.05■□□□□ -0
CLSTN3-213ENST00000541953 DOPEY1Q5JWR5 2465 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 SSU72P8A0A1W2PR75 194 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 MGAT4DA6NG13 374 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 A6NL46 340 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 TCP11X1B4DZS4 312 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 MASP2O00187 686 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 MEN1O00255 615 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 BTN3A3O00478 584 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 AKR1B10O60218 316 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 KCNJ13O60928 360 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 EPOP01588 193 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 PVRP15151 417 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 ST6GAL1P15907 406 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 LPOP22079 712 aaPredicted RBP15.04■□□□□ -0
CLSTN3-213ENST00000541953 COL8A1P27658 744 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 ARHGAP25P42331 645 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 LMAN1P49257 510 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 RPS15P62841 145 aaKnown RBP15.04■□□□□ -0
CLSTN3-213ENST00000541953 XIAPP98170 497 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 MSLNQ13421 630 aaPredicted RBP15.04■□□□□ -0
CLSTN3-213ENST00000541953 EIF2S3LQ2VIR3 472 aaKnown RBP15.04■□□□□ -0
CLSTN3-213ENST00000541953 FHL5Q5TD97 284 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 JMJD6Q6NYC1 403 aaPredicted RBP15.04■□□□□ -0
CLSTN3-213ENST00000541953 KLHL35Q6PF15 583 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 ZBTB2Q8N680 514 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 EFCAB3Q8N7B9 438 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 OR4E2Q8NGC2 313 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 OR4K2Q8NGD2 314 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 OR13C4Q8NGS5 318 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 OR2L2Q8NH16 312 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 ZNF398Q8TD17 642 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 C19orf60Q96EN9 201 aa15.04■□□□□ -0
CLSTN3-213ENST00000541953 QKIQ96PU8 341 aaKnown RBP eCLIP15.04■□□□□ -0
CLSTN3-213ENST00000541953 SRPK1Q96SB4 655 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms