RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PTPN9P43378 593 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 PAPOLAP51003 745 aaKnown RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 TPI1P60174 286 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 STIM1Q13586 685 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 GTF2H3Q13889 308 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 LBRQ14739 615 aaKnown RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 RBBP7Q16576 425 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 PLA2G4EQ3MJ16 856 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 FOXD4L6Q3SYB3 417 aaPredicted RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 NKAIN1Q4KMZ8 207 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 PPP1R15BQ5SWA1 713 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 PDPK2PQ6A1A2 396 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 CRTC3Q6UUV7 619 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 FOXD4L3Q6VB84 417 aaPredicted RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 KBTBD2Q8IY47 623 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 BEND7Q8N7W2 519 aaPredicted RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 C3orf20Q8ND61 904 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 LILRB4Q8NHJ6 448 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 FKBP10Q96AY3 582 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 AGAP2Q99490 1192 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 NAA15Q9BXJ9 866 aaKnown RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 RNF32Q9H0A6 362 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 WDR54Q9H977 334 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 RAD18Q9NS91 495 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 FAM207AQ9NSI2 230 aaPredicted RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 IL17CQ9P0M4 197 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 TEKT2Q9UIF3 430 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 TMEM59LQ9UK28 342 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 MKL2Q9ULH7 1088 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 PCDHA7Q9UN72 937 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 PCYT1BQ9Y5K3 369 aaPredicted RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 AKAP6Q13023 2319 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 FBN1P35555 2871 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 INTS1Q8N201 2190 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 A0A0J9YYE9 177 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 EIF3CLB5ME19 914 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 CHUKO15111 745 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 TTI1O43156 1089 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 DAPK3O43293 454 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 OR2B3O76000 313 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 ZNF202O95125 648 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 LCA5LO95447 670 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 PRAMEF1O95521 474 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 LSM8O95777 96 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 GNA14O95837 355 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 HPP00738 406 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 TRBC1P01850 177 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 UMODP07911 640 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 BRAFP15056 766 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 CYP11B1P15538 503 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 CTPS1P17812 591 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 HOXC12P31275 282 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 CDH5P33151 784 aaPredicted RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 CTSCP53634 463 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 DRG2P55039 364 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 ALDH6A1Q02252 535 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 SYCP1Q15431 976 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 ZNF789Q5FWF6 425 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 HENMT1Q5T8I9 393 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 ATL3Q6DD88 541 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 MRPL14Q6P1L8 145 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 TLDC1Q6P9B6 456 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 PAMR1Q6UXH9 720 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 PHC2Q8IXK0 858 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 GHDCQ8N2G8 530 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 FAM98AQ8NCA5 519 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 DLG3Q92796 817 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 EIF3CQ99613 913 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 ZSCAN5AQ9BUG6 496 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 BDH2Q9BUT1 245 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 CFAP45Q9UL16 551 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 CNOT6Q9ULM6 557 aaKnown RBP9.15□□□□□ -0.94
YBX3-211ENST00000541351 ADGRG1Q9Y653 693 aa9.15□□□□□ -0.94
YBX3-211ENST00000541351 ANKRD62A6NC57 917 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 OR6C74A6NCV1 312 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 INAFM1C9JVW0 142 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 FAM227AF5H4B4 570 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 DFFAO00273 331 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 WFS1O76024 890 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 KLHL18O94889 574 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 CDK14O94921 469 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 CBSLP0DN79 551 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 HLA-DPA1P20036 260 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 NDUFS1P28331 727 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 CBSP35520 551 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 PPP1R2P41236 205 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 CARSP49589 748 aaKnown RBP9.14□□□□□ -0.95
YBX3-211ENST00000541351 KPNA2P52292 529 aaKnown RBP9.14□□□□□ -0.95
YBX3-211ENST00000541351 XRCC4Q13426 336 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 SLC5A12Q1EHB4 618 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 COBLL1Q53SF7 1204 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 ANKRD20A8PQ5CZ79 823 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 C1orf189Q5VU69 101 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 CCDC185Q8N715 623 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 FAM172AQ8WUF8 416 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 RXFP2Q8WXD0 754 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 RND1Q92730 232 aa9.14□□□□□ -0.95
YBX3-211ENST00000541351 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.14□□□□□ -0.95
YBX3-211ENST00000541351 CELF6Q96J87 481 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms