RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 PLIN3O60664 434 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 NDUFS3O75489 264 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 TNFSF15O95150 251 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 ALDOAP04075 364 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 C2P06681 752 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 MYL2P10916 166 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 POLR2EP19388 210 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 CSKP41240 450 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 SUOXP51687 545 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 COPAP53621 1224 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 ADARP55265 1226 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 BMPR2Q13873 1038 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 PDE1CQ14123 709 aaPredicted RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 ZRSR2Q15696 482 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 GPR33Q49SQ1 333 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 ESRP1Q6NXG1 681 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 C6orf89Q6UWU4 347 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 GLT6D1Q7Z4J2 308 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 CILP2Q8IUL8 1156 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 SLC22A9Q8IVM8 553 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 BBS7Q8IWZ6 715 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 PGBD5Q8N414 524 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.27□□□□□ -1.09
CHD4-208ENST00000540960 ARMC2Q8NEN0 867 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 OR4L1Q8NH43 312 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 BLOC1S5Q8TDH9 187 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 PDCD6IPQ8WUM4 868 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 HEXDCQ8WVB3 486 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 STON2Q8WXE9 905 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 HDAC10Q969S8 669 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 FAR2Q96K12 515 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 LRRC37BQ96QE4 947 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 MRPL57Q9BQC6 102 aaKnown RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 TRMOQ9BU70 441 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 OSBPL1AQ9BXW6 950 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 RASSF4Q9H2L5 321 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 ADNPQ9H2P0 1102 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 SPHK2Q9NRA0 654 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 CATSPERZQ9NTU4 200 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 TXLNGQ9NUQ3 528 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 DKK3Q9UBP4 350 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.27□□□□□ -1.09
CHD4-208ENST00000540960 VWA7Q9Y334 891 aa8.27□□□□□ -1.09
CHD4-208ENST00000540960 RGSL1A5PLK6 1076 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 CFAP73A6NFT4 308 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 TRIM13O60858 407 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 SDC3O75056 442 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 KLHL2O95198 593 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 PGLSO95336 258 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 AHSGP02765 367 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 IGHV4-34P06331 123 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 SRPRAP08240 638 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 THEGLP0DJG4 465 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 RALBP11234 206 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 PABPC1P11940 636 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 EZRP15311 586 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 FOXN2P32314 431 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 MNAT1P51948 309 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 POLE2P56282 527 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 CORO7P57737 925 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ATP6V0D1P61421 351 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ST8SIA6P61647 398 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ARF5P84085 180 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ECT2LQ008S8 904 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ZBTB16Q05516 673 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 CACNG1Q06432 222 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 EIF4HQ15056 248 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 ACAP2Q15057 778 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ZKSCAN8Q15776 578 aaPredicted RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 PITRM1Q5JRX3 1037 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 GRAMD4Q6IC98 578 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 BRAT1Q6PJG6 821 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 CES3Q6UWW8 571 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 USP45Q70EL2 814 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 PIWIL4Q7Z3Z4 852 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 CBARPQ8N350 705 aaPredicted RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 NKAPQ8N5F7 415 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.26□□□□□ -1.09
CHD4-208ENST00000540960 GPATCH11Q8N954 259 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 OR2AP1Q8NGE2 309 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 DTX3LQ8TDB6 740 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 WBP2Q969T9 261 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ALG14Q96F25 216 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 MYO19Q96H55 970 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 ELMO2Q96JJ3 720 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 SCYL1Q96KG9 808 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 AGAP2Q99490 1192 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 KLF6Q99612 283 aaPredicted RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 MCMBPQ9BTE3 642 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 REPIN1Q9BWE0 567 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 BBS2Q9BXC9 721 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 GPR63Q9BZJ6 419 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 PCED1AQ9H1Q7 454 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 MRPL46Q9H2W6 279 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 EML4Q9HC35 981 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 MLXIPLQ9NP71 852 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 SAR1AQ9NR31 198 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 PIH1D1Q9NWS0 290 aaKnown RBP8.26□□□□□ -1.09
CHD4-208ENST00000540960 TAS2R13Q9NYV9 303 aa8.26□□□□□ -1.09
CHD4-208ENST00000540960 SLC17A7Q9P2U7 560 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms