RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 PDZK1P1A8MUH7 402 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 SGTAO43765 313 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 NUDT21O43809 227 aaKnown RBP17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 TRIM16O95361 564 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 AHSGP02765 367 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 GP1BAP07359 652 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 PRSS56P0CW18 603 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 CKMT1AP12532 417 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 ENO3P13929 434 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 CKMT2P17540 419 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 XRCC1P18887 633 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 SERPINB9P50453 376 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 SLC12A2P55011 1212 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 DAB2P98082 770 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 DEFB133Q30KQ1 61 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 IYDQ6PHW0 289 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 PIP4P1Q86T03 277 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 LDB1Q86U70 411 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 PHC3Q8NDX5 983 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 GPR156Q8NFN8 814 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 OR2I1PQ8NGU4 316 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 FOPNLQ96NB1 174 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 EPB41L1Q9H4G0 881 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 COG4Q9H9E3 785 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 PLAC1Q9HBJ0 212 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 SARS2Q9NP81 518 aaKnown RBP17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 FBXO6Q9NRD1 293 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 POT1Q9NUX5 634 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 KCNK6Q9Y257 313 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 DNAJC16Q9Y2G8 782 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 PRKAB1Q9Y478 270 aa17.18■□□□□ 0.34
CLSTN3-210ENST00000540931 TM4SF5O14894 197 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 FFAR2O15552 330 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 HAUS5O94927 633 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 GLB1P16278 677 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 AK4P27144 223 aaPredicted RBP17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 AOAHP28039 575 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 CA5AP35218 305 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 GPR3P46089 330 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 FASLGP48023 281 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 RGS4P49798 205 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 POU4F1Q01851 419 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 CLPPQ16740 277 aaPredicted RBP17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 KBTBD12Q3ZCT8 623 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 C14orf28Q4W4Y0 310 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 TTC23LQ6PF05 361 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 CAPN12Q6ZSI9 719 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 NEK10Q6ZWH5 1172 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 TRIM48Q8IWZ4 208 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 SFRP1Q8N474 314 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 MAGEC3Q8TD91 643 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 INPP5DQ92835 1189 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 CNDP2Q96KP4 475 aaKnown RBP17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 APOLD1Q96LR9 279 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 AARSD1Q9BTE6 412 aaKnown RBP17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 PARD6BQ9BYG5 372 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 UCK1Q9HA47 277 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 POPDC3Q9HBV1 291 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 SYTL2Q9HCH5 934 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 IL1RAPL1Q9NZN1 696 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 PADI4Q9UM07 663 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 VWA7Q9Y334 891 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 PCDHGA1Q9Y5H4 931 aa17.17■□□□□ 0.34
CLSTN3-210ENST00000540931 TDRD6O60522 2096 aaKnown RBP17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 RIPK2O43353 540 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 SIGLEC6O43699 453 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 SH3BP5O60239 455 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 KRT38O76015 456 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 SLCO2B1O94956 709 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 ACSL3O95573 720 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 INHBAP08476 426 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 GIMD1P0DJR0 217 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 ACP1P24666 158 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 PBLDP30039 288 aaPredicted RBP17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 VSNL1P62760 191 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 E2F1Q01094 437 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 NFE2L1Q14494 772 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 PROX2Q3B8N5 592 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 PLA2G4EQ3MJ16 856 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 ZC3HC1Q86WB0 502 aaKnown RBP17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 C17orf82Q86X59 251 aaPredicted RBP17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 UNC5BQ8IZJ1 945 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 PPM1NQ8N819 430 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 BAHD1Q8TBE0 780 aaPredicted RBP17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 CAVIN3Q969G5 261 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 CXorf40BQ96DE9 158 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 TXLNGYQ9BZA5 131 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 MVB12BQ9H7P6 319 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 TBC1D29Q9UFV1 150 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 SLC23A2Q9UGH3 650 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 POLG2Q9UHN1 485 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 RABGEF1Q9UJ41 708 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 TRMT6Q9UJA5 497 aaKnown RBP17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 ZNF180Q9UJW8 692 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 DHRS7Q9Y394 339 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 PRSS21Q9Y6M0 314 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 CEP295Q9C0D2 2601 aa17.16■□□□□ 0.34
CLSTN3-210ENST00000540931 SLC5A10A0PJK1 596 aa17.15■□□□□ 0.34
CLSTN3-210ENST00000540931 EME2A4GXA9 379 aaPredicted RBP17.15■□□□□ 0.34
CLSTN3-210ENST00000540931 A6NCN8 305 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms