RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 IL17FQ96PD4 163 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 TSGA13Q96PP4 275 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 IL12RB2Q99665 862 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 RIBC2Q9H4K1 309 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 MOCS1Q9NZB8 636 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 AHSPQ9NZD4 102 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 PRKAG3Q9UGI9 489 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 RWDD3Q9Y3V2 267 aa9.41□□□□□ -0.9
TTC39C-203ENST00000540918 TCRBV5S1A1TA0A578 114 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 KDM1AO60341 852 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 EPN2O95208 641 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 KCNH1O95259 989 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 PGM3O95394 542 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 CLDN9O95484 217 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 SLC35E2BP0CK96 405 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 COL6A2P12110 1019 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 CYP4B1P13584 511 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 ALAS2P22557 587 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 CYP4F3Q08477 520 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 C1orf61Q13536 156 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 SPRED3Q2MJR0 410 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 PTCHD3Q3KNS1 767 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 PAGE2BQ5JRK9 111 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 ACBD5Q5T8D3 534 aaPredicted RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 DHDDSQ86SQ9 333 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 RPAINQ86UA6 219 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 CMTR2Q8IYT2 770 aaKnown RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 NMD3Q96D46 503 aaKnown RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 LMLNQ96KR4 655 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 PPP3R2Q96LZ3 170 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 RIPOR3Q96MK2 946 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 OLFM3Q96PB7 478 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 ASB2Q96Q27 587 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 TDRD1Q9BXT4 1180 aaKnown RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 RSPH9Q9H1X1 276 aaPredicted RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 AKTIPQ9H8T0 292 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 CSNK1G1Q9HCP0 422 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 FBXW2Q9UKT8 454 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 NCOR1O75376 2440 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 ZCWPW2A0A1B0GU75 182 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 LOC730098B7Z3J9 87 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 RECQL5O94762 991 aaPredicted RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 TRBC1P01850 177 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 HPGDP15428 266 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 IDH2P48735 452 aaKnown RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 DIO3P55073 304 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 AMZ1Q400G9 498 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 TCEAL5Q5H9L2 206 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 RFLNAQ6ZTI6 216 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 TMEM135Q86UB9 458 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 ADGRG2Q8IZP9 1017 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 LIX1Q8N485 282 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 TMEM145Q8NBT3 493 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 ATL1Q8WXF7 558 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 PLEKHA8Q96JA3 519 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 MCOLN1Q9GZU1 580 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 RAPGEFL1Q9UHV5 662 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 VPS4AQ9UN37 437 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 SH3GLB1Q9Y371 365 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 USP3Q9Y6I4 520 aa9.4□□□□□ -0.9
TTC39C-203ENST00000540918 RIF1Q5UIP0 2472 aaKnown RBP9.4□□□□□ -0.9
TTC39C-203ENST00000540918 APC2O95996 2303 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 TRIM43BA6NCK2 446 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 CAPN8A6NHC0 703 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 E7ESA3 106 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 H3BN98 237 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 TCEA3O75764 348 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 PGLSO95336 258 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 LDLRP01130 860 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 RPN2P04844 631 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 ANXA4P09525 319 aaPredicted RBP9.4□□□□□ -0.91
TTC39C-203ENST00000540918 GRSF1Q12849 480 aaKnown RBP eCLIP9.4□□□□□ -0.91
TTC39C-203ENST00000540918 RFTN1Q14699 578 aaPredicted RBP9.4□□□□□ -0.91
TTC39C-203ENST00000540918 FAM98BQ52LJ0 330 aaKnown RBP9.4□□□□□ -0.91
TTC39C-203ENST00000540918 ANKRD26P1Q6NSI1 321 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 RANBP10Q6VN20 620 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 FRMD7Q6ZUT3 714 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 AMZ2Q86W34 360 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 AHI1Q8N157 1196 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 LPGAT1Q92604 370 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 TRIM43Q96BQ3 446 aaPredicted RBP9.4□□□□□ -0.91
TTC39C-203ENST00000540918 NUS1Q96E22 293 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 VMP1Q96GC9 406 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 NR1H4Q96RI1 486 aaPredicted RBP9.4□□□□□ -0.91
TTC39C-203ENST00000540918 LEF1Q9UJU2 399 aaPredicted RBP9.4□□□□□ -0.91
TTC39C-203ENST00000540918 MYO10Q9HD67 2058 aa9.4□□□□□ -0.91
TTC39C-203ENST00000540918 LAMB1P07942 1786 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 MYOCOSA0A1B0GUC4 107 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 ZW10O43264 779 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 IDSP22304 550 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 SLC6A11P48066 632 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 UBE3AQ05086 875 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 C2orf80Q0P641 193 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 NEDD8Q15843 81 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 MRPL43Q8N983 215 aaKnown RBP9.39□□□□□ -0.91
TTC39C-203ENST00000540918 OR10A6Q8NH74 314 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 MAGEC3Q8TD91 643 aa9.39□□□□□ -0.91
TTC39C-203ENST00000540918 XAGE5Q8WWM1 108 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms